Sander lucioperca (pikeperch): 116058860
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Entry
116058860 CDS
T07345
Symbol
trappc8
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X2
KO
K20305
trafficking protein particle complex subunit 8
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116058860 (trappc8)
Membrane trafficking [BR:
sluc04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
116058860 (trappc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
SNAP
Motif
Other DBs
NCBI-GeneID:
116058860
NCBI-ProteinID:
XP_031167651
Ensembl:
ENSSLUG00000021244
LinkDB
All DBs
Position
11:28352026..28382763
Genome browser
AA seq
1488 aa
AA seq
DB search
MAQCVQSVQEFVQDSFVPMVAVLCSEEAERVTRKNKLGFAELLRPFCRLTSEGHIRDPNN
QMQVVKNLRICVNNVVTSPTPASAASSPALRRLLNDVVLSCQPQEGAATNVITAGDYDLS
FSDHCVKASLPWYSAWRETLLEVSTSQHHTGIPATTPWFEAYRENFLQSMPASDHEFLNH
YLACLLVVSSTEAVPVEQFLKLSQEQHRVQHSGEYTNPKWFIPNTLKYYVLLHDMSEGDE
QRADSVYEDMKQRYGHQGCYLLKLNSRTSSAEEDEQIPDPWSQYLHRNTLQNQDVLDEGA
AAGSAAAAENNISAAEGDGQHLTEKDGASTSLDSHPLQLDPASSSGSLHALTAANAELKK
GSREPEGPAGGHGACLTLNDHDHIRQFIQEFTFRGLLPHVEKNIRQLNDQLVSRKGLSRS
LFTATKKWFGGGKVPEKSISEPKSTCGLLYPPEAPELQIRKMADLCFLVQHYELAYSCYH
TAKKDFLSDQAMLYAAGALEMAAVSAFLQPGAPRPYPAHYMDTAIQTYRDVCKNMVLAER
CALLSAEILKSQGKYSEAATLLIKMTSEDSDLRSALLLEQAAHCFINMRNPMVRKFAFHM
ILAGHRFSKAGQRRHALRCYCQAMQVYKERGWSLAEDHINFTIGRQSFTLSQPENAVTAF
RHILTNDSRQTATQQGAFLREYLYVYKSVMGGDADSLPELPLPCIHSSATRVYFGHERRL
AEGEKQAATHVSLDQEYDQDTAAMWGHLEEQLVAAANRGTVPANFQPTQCCLNSQTDNLR
HPLAVAEEPIIVEVTFRNPLKVPLALSNLSLLWRFSADGASPSQDRTTDWSAAEVITNEE
TVSVGMAQRDDVVATEIIVEFLLGPEETKTARLRLLPHATGQLHIVGVVYDLAAASSGET
APSTEGQQMLDLMVVRGRQDLKIRGPRLNQTKEDKMLIRHGLDLRLDPIITPPMPLMEVF
FLQFPTALLCGEIRKAYVEFCNVSGVALCGLRVASTHPDFFTFGSQTTTPVTPLSPTSAE
NCSAYKTLATAREPGSVASEMLVSAEDFSQPSGVMDIPMDGSTLQPGQSTQLPLWLRGPD
QEGVHEINFLFYYESTEKGIRISHRVLRHTVFICASRSLSVQASACRSSVPPHHSVEDRG
GAGTLVFVDVENINTSEAGVREFHIIQVSSSSQHWRLHRCINPAKDKDCKLTSRERAKLC
FRATRCKPHQATSDAVEKYTFADLNLGNERIISSSTPCGDFFFRGCRPSESQRADEAPSR
TSCSRQSQCVPAEDRAADISSIVRKCNELDLNIIVIWKAYVVEDNKQLILEGQLHVALQS
IGKEASSLTPKEEAQEMVLLKFKSELPPPAVPPSAELSQLIKTNLHYPETYTHPFVQDSL
CVVPVSLTLSNCSSAQVDVLIDLRHRSTSGESLEVHSSFTWVGQTQYKLQLQPQQVLGLT
LRACFLQPGVYNLNTPRVFAKPAEQDAMCETSQQTASPALIIISSSSA
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggcccaatgtgttcagtcggtgcaggagttcgttcaggactcgttcgtcccgatggtg
gccgtcttatgcagcgaggaggcggagagagtgacccgcaagaacaagctgggcttcgcg
gagctgctgcggcctttctgcagattgacgtccgaaggtcacatccgggaccccaataac
cagatgcaggttgtgaaaaacctgcgcatctgtgtcaacaacgtggtaacgagccccacc
cccgcgtctgccgcctccagccccgccctgcggcgactgctcaacgacgtggtgctgtcc
tgccagccacaggagggcgctgccaccaacgtcatcacggcaggagactatgacctcagc
ttcagtgatcactgtgttaaagctagcctcccctggtacagtgcctggagagaaacactg
ttggaagtcagcacctcccagcaccacacaggtatcccagctaccacgccctggttcgaa
gcctacagggagaacttcctgcagtcgatgcccgcctccgaccacgagtttctcaaccac
tacctcgcctgcctgctggtggtgtcctccacggaggccgtcccggtggagcagttcctc
aagctctcccaggagcagcacagggtccagcacagcggagagtacaccaaccccaagtgg
ttcatccccaacacgctcaagtactacgtcttactgcacgacatgagcgagggcgacgag
cagagggccgactcggtgtatgaggacatgaaacagaggtacggtcatcagggctgctat
ctgttgaaactgaactctcgtacgtcctcggcagaagaagacgaacagattccagacccc
tggagtcagtacctgcacaggaacactctgcagaaccaggatgtgctggacgaaggagct
gcagctgggagcgctgctgctgcagagaacaacatcagtgcagctgagggggacggccag
cacctaacagagaaagacggcgcgtccaccagcctggacagccatcctctgcagctggac
ccagccagcagctcggggagcctgcacgccctcaccgctgctaacgctgagctgaagaaa
ggctccagagagccagagggcccagcagggggccacggcgcctgtctcaccctgaatgac
cacgaccacatcagacagttcatccaggagttcaccttcagaggcctgctgccacacgta
gagaagaacatccgacagctcaacgaccagctggtctccaggaaagggctgagtcgctct
ctgttcacggccaccaagaagtggtttggcggagggaaggttccggagaagagcatcagt
gagccaaagagcacctgtggccttctatatcccccagaagcaccggagctgcagatcagg
aagatggccgacctgtgcttcctggtccagcactacgagctggcctacagctgttaccac
actgccaagaaggacttcctgtcagaccaggccatgctgtatgctgcaggagcactggaa
atggctgcagtgtcggccttcctgcagcctggagctcccagaccgtatccagcacactac
atggacaccgccatccagacgtacagagatgtctgcaagaacatggtgctggctgagcgc
tgtgcattactcagtgctgagatcctaaagagtcagggcaaatactcggaggctgctacg
cttctcatcaagatgaccagcgaggactctgacctgcgcagtgctctgctgctggaacag
gctgcccactgctttattaatatgcggaaccctatggtgcgcaagtttgccttccatatg
atcctggctggtcatcgtttcagcaaagcgggacagaggaggcacgcgctgcgctgctac
tgccaggccatgcaggtttacaaggagcggggctggtccctggcagaggaccacatcaac
ttcaccatcggccggcagtccttcaccctgtcccagccggagaacgcggtgacagccttc
agacacatcctgaccaatgacagcaggcagacggccacgcagcagggcgccttcctccga
gagtatctctacgtttataagagtgtgatggggggggacgcagacagcctcccagagctg
cctctgccttgcatccacagctcagccaccagggtctacttcggacatgaacgccgcctt
gcagaaggggagaagcaggcagccacccacgtgtccctggaccaggagtatgaccaggat
acggcagccatgtggggccacctagaggagcagcttgtggccgccgccaacagggggact
gtcccagcaaacttccagcccacccagtgctgcctgaacagccagacagacaacctgcgc
cacccactggctgtggccgaggagccaatcatcgtggaggtgacgttcaggaaccctctg
aaggtgcctctggctctgtccaacctgtctctcctctggaggttcagtgccgacggcgcg
tctccgtcgcaggacaggaccacggattggtcggcagcggaggtcatcaccaacgaggag
acggtgtctgtcgggatggcacagagagacgacgtggtcgccactgagatcatcgtggag
tttctcctgggaccagaggagaccaagacggctcgactccggctgctgccacacgccact
ggccagctgcacattgtgggtgtggtgtatgacctggctgcagcgtcctctggagagacg
gctcccagcactgaaggccagcagatgctggatctcatggtggttcgtggcagacaggac
ctgaagatccggggcccacgactcaaccagaccaaagaggacaagatgttgattcgacat
ggcttagacctgcgtctggatcccatcataactccacccatgcccctgatggaggtcttc
ttcctgcagtttcccacggcgctgctgtgcggtgagatcaggaaggcctacgttgagttc
tgtaacgtcagcggcgttgctctgtgcggcctccgggtggcgtccacacacccagatttc
tttaccttcggcagccagaccacgacgcccgtcacgcccctcagcccgacctcggctgag
aactgctcggcctataaaacgctggccacggcgcgcgagccaggctccgtggcgtctgag
atgttggtctcagcggaggacttcagccagccgtccggtgtgatggacatccccatggat
ggcagcacgctgcagccggggcagtccacccagctgcctctctggctcagaggaccagac
caggagggagtccacgaaatcaacttcctgttctactacgagagcacggagaaaggaatc
cgaatcagtcatcgggtgttgcgtcacacagtgttcatctgcgccagccgctccctgagc
gtgcaggcgtcggcctgccgcagcagcgttcccccacaccacagcgtggaagacagaggc
ggcgctggaacgttggtctttgtcgacgtggagaacatcaacacgagtgaagctggcgtg
cgcgagttccacatcatccaggtgtcgagcagcagtcaacactggcgcctccacaggtgc
atcaacccggccaaggacaaagactgtaaactcaccagcagagaaagagccaagctgtgt
ttcagggccacgcgatgcaagccccaccaagctacctcggacgccgtagagaaatacacc
tttgcagacctgaatctgggaaatgaacggatcatcagctcctccacgccctgcggagat
ttcttcttccggggctgtcgcccctccgagtcccagcgagcggatgaggcgccgtccagg
acgtcctgcagcagacagagtcagtgtgtccccgctgaggacagagccgctgacatcagc
agcattgtcaggaagtgtaacgagctggacctcaacatcatcgtcatctggaaggcctac
gtggtggaggacaacaaacagctgatcctggagggccagctccacgtggcgctgcagagc
atcggcaaggaggccagctctctgactcctaaagaggaagctcaggagatggtgctgttg
aagtttaaatcagagctccctcctccggctgtcccgccctctgcagagctgtcccaactc
atcaagaccaacctgcactaccccgagacctacacacacccgtttgtccaggacagtctc
tgtgtggtgccggtgtctctgacgctgtccaactgctcctcggctcaggtggacgtcctc
atcgacctcaggcacaggagcaccagtggcgagtctctggaggtgcacagctcgttcacc
tgggtgggccagacgcagtacaagctgcagctgcagcctcagcaggtgctgggcctgacc
ctgcgagcctgcttcctccagccgggagtctacaacctcaacacgccgcgagtcttcgcc
aagccggccgagcaggacgccatgtgtgagacgagtcagcagacagccagtcctgctctc
atcatcatcagcagcagcagcgcctga
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