Sander lucioperca (pikeperch): 116062764
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Entry
116062764 CDS
T07345
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116062764
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116062764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
U-box
Gp58
zf-RING_6
zf-RING_10
zf-RING_11
zf-C2H2
MRP-S31
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
116062764
NCBI-ProteinID:
XP_031173259
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Position
13:25235341..25237079
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AA seq
556 aa
AA seq
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MAQKGVQLDREAFSCSICLDLLKDPVTTPCGHNYCMNCIKSHWDVEDCKNSYSCPQCRKT
FTSRPDLLKNNLLSDLVEELKKTGLQAAPADHCYAGAEDVACDVCTGRKLKAHKSCLQCL
ASFCEKHLQLHYESETFKKHKLVEPSKKLQENVCSRHDEVMKMFCRTDQQLICYLCSVEE
HKGHDTVSAAAERAERQRELEGSRQNIQQRIQDREKDVKLLQQQAEAINVSADKAVEDSE
KIFTELIRLLEKRSSDVKQQVRSQQKREVSRVKELQEKLEQEITELKRKDAELKKLSHTE
DHNQFLHNYPSLSPLSQSTSSIHIRPLSCFEDVTAAVSEVRDKLQDVLREKWTKVSLTGT
EVDVLLLQPEPKTRTELLKYSCEITLDPNTAYTWLLLSEGNRKATIMRQQQSYSSLPDRF
TDWWQVLSRESLTGRCYWEVEWRGGGVYVAVAYKNISRAGRSDECGFGRNDKSWALDCDN
NNYIFWYNNVQTPVSGPESSRVGVYLDHSAGILSFYSVSETMTLLHRVQTTFTQPLYAGL
RVYWCYGVSAELCKLK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggaagccttctcttgttccatctgtctggat
ctactgaaggatccggtgactactccatgtggacacaactactgcatgaactgtattaaa
agccactgggatgtagaggattgtaagaacagctacagctgtcctcagtgcaggaagacg
ttcacatcgaggcctgacctgctgaaaaacaacttgttatcagatttagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtg
gcctgtgatgtctgcaccgggagaaaactcaaagcacacaagtcctgtctgcaatgtctg
gcttctttctgtgagaaacatcttcagcttcattatgaatcagaaacattcaagaaacac
aagctggtggagccgtccaagaagctccaggagaacgtctgctctcgtcatgatgaggtg
atgaagatgttctgtcgtactgatcagcagcttatctgttatctctgctctgtggaggaa
cataaaggccacgacacagtctcagctgcagcagagagagctgagaggcagagagagctc
gaggggagtcgacaaaacatccagcagagaatccaggacagagagaaagatgtgaagctg
cttcaacagcaggcggaggccatcaatgtctctgctgataaagcagtggaggacagcgag
aagatcttcactgagctgatccgtctcctggagaaaagaagctctgatgtgaagcagcag
gtcagatcccagcagaaaagagaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctgaagaagctctcacacacagag
gatcacaaccagtttctacacaactacccctcactgtcaccactcagccaatcaacatcc
agcatccatatccgtcctctgagctgctttgaggacgtgacagcagccgtgtcagaagtc
agagataaactacaggacgtcctgagagagaagtggacaaaggtctcactgacagggact
gaagtggatgttttactgttacaaccagagcccaagaccagaactgaattattaaaatat
tcatgtgaaatcacactggatccaaacacagcatacacatggctgttattatctgagggg
aacaggaaagcaacaataatgagacaacaacagtcttattctagtctcccagacagattc
actgactggtggcaggtcctgagtagagagagtctgactggacgttgttactgggaggtg
gagtggagaggaggaggagtttatgtagcagtcgcatacaagaatatcagcagagcaggg
aggtcagatgaatgtggatttggacgaaatgacaaatcttgggcgttagattgtgacaac
aacaattatatattttggtacaacaatgtccaaactcccgtctcaggtcctgagtcctcc
agagtaggagtgtacctggatcacagtgcaggtattctgtccttctacagcgtctctgaa
accatgactctcctccacagagtccagaccacattcactcagcccctctatgctggacta
agggtttattggtgttatggagtctctgctgagttgtgtaaactgaaatag
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