Sander lucioperca (pikeperch): 116064006
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Entry
116064006 CDS
T07345
Name
(RefSeq) RNA binding protein fox-1 homolog 3-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sluc03041
]
116064006
Spliceosome [BR:
sluc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116064006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
116064006
NCBI-ProteinID:
XP_031174919
Ensembl:
ENSSLUG00000007970
LinkDB
All DBs
Position
21:complement(21842870..22271429)
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AA seq
432 aa
AA seq
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MHVVTPVTSGKQEEFHVLLFFLLTPTRAVAMVSGKVQLKATGNTLCKSGSVAVFGNVVYS
GLLNDHLWHLGVPLFTRLGNQEATNPPEAMAQPYTPAQYPPPPQNGIPAEFAAPHPLPTQ
DYSGQSRVPEHALTLYTPTQTHSDPAGTDNSTPAITATTTAPVSVLHHLQTLFSTRCQQT
DDVTQTEGSQQLQLQHSDSSEKQQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN
ERGSKGFGFVTFETSTDADRAREKLNGTIVEGRKIEVNNATARVMTNKKVANPYTNGWKL
NPVVGAVYGPELYAVTGFPYPATGATVAYRGAHLRGRGRAVYNTFRTAPPPPPIPAYGAV
VYQDGFYGAEIYGGYAAYRFAQPTTTAAYSDSYGRVYATADPYHHTIGPAATYSVGTMAS
LYRGGYSRFTPY
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcatgttgtcacaccggtgacttcaggaaagcaggaggagtttcacgttctactgttt
ttcctgttaactccgactcgggcagtggccatggtgtctggaaaagtgcagctgaaggct
accggaaacacgttgtgtaagtcaggaagcgttgctgtcttcgggaacgtggtatacagc
ggactgctgaacgatcacctctggcatttgggagtgcccctctttacaagactgggtaac
caagaggccaccaatcccccagaagcgatggcccagccgtacaccccagcccagtaccca
cctcccccacagaatggcatccccgcagagtttgcggcaccgcacccgcttccaacccag
gactacagcgggcagagccgggttcccgagcacgctctgaccctctacacgcccacacag
acacacagcgatccggccggcactgacaacagcacacccgccatcaccgccaccacgacc
gcaccggtcagtgtccttcatcatctgcaaacactgttctcaacacgctgtcagcaaaca
gatgatgtgacgcaaacagagggctctcagcagctccagctccagcactcagactcttca
gagaagcagcagccgaaaaggttacatgtctccaacattcccttccgcttccgggaccct
gacctaaggcaaatgtttgggcaatttggaaagattttagatgtggagattatctttaat
gagcgaggatccaagggctttgggtttgtaacttttgaaacaagcacagatgctgatcgt
gcacgggagaaactaaacggtacaatcgtagagggacgcaaaatagaggtgaacaacgca
acagcacgagtgatgacaaacaaaaaagtggccaacccttacacgaatggctggaagctg
aatccagtggtgggagctgtctatggtcctgaactgtatgccgtaacagggtttccctac
cctgccacaggcgctacggtggcctataggggtgcccacttgcgaggtcgggggcgggct
gtgtacaacacattccgcacagctccaccgccaccaccaatcccagcttatggagcggtg
gtgtaccaagatggcttctatggtgcagagatctatggtggctatgcagcatacagattt
gcccagcccaccaccaccgctgcttacagtgacagctatggcagagtctatgcaacagca
gacccctaccaccacacgattggccctgctgccacatacagtgtggggactatggctagc
ctatacagaggagggtacagtcgcttcactccctactaa
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