Sander lucioperca (pikeperch): 118492922
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Entry
118492922 CDS
T07345
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
118492922
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118492922
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-B_box
SPRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
Prok-RING_4
U-box
zf-Nse
Baculo_IE-1
zf-RING_6
zf-RING_4
Gp58
Motif
Other DBs
NCBI-GeneID:
118492922
NCBI-ProteinID:
XP_035860810
LinkDB
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Position
9:24457634..24460133
Genome browser
AA seq
568 aa
AA seq
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MSLRGEMAQKGVQLDRETFSCSICLDLLKDPVSIPCGHSYCMDCIKEFWDEKKIYSCPQC
RETFIPRPFLLKNTMLADLVEQLKKAGLLSLRHEASPADHCYAGPEDVACDVCTGRKLKA
LKSCLVCLVSYCEKHLQPHYELPIFEKHKLVEPSKNLQENICSHHDEVMKIFCCTDQQLI
CYLCSVDEHKGHDTVSAAAERTERQKELQGSRQNIQQRIQDREKDVKLLKQEVEAINHSA
DKVVEDSEKIFTELICVMEKRRSDVKQQVRFQQETEVSRVKELQEKLEQEITELKRKDAE
MKKISDTEDHNQFLHNYSSLSPLSESTDSPSINIRPLRYFEDVTAAVSEVRDKLQDFLNE
KLTNISLTVTEADVLLSNPQPEPKTRADFLKYSREITLDPNTAHTQLLLSEGNRKGTLIS
HPQSFSSHPDRFTKEFQVLSRESLTGRCYWEVEWRGEVIYVAVAYKNVTRAGSSNACRFG
LNDKSWAIRCDNNSFKLLYKNVRTLVPGPVSSRVGVYLDHSAGILSFYSVSDTMTLLHRV
QTTFTQPLYAGLSFFTTTKDAAEFCKLK
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgagaggagaaatggcgcagaaaggagttcaactggaccgggaaactttctct
tgttcaatctgtctggatctactgaaggatccggtgagtattccctgtggacacagctac
tgtatggactgtattaaagagttctgggatgagaagaaaatctacagctgtccccagtgc
agggaaactttcataccgaggcctttcctgctgaaaaacaccatgttagcagatttagtg
gagcaactaaaaaaggctggactcctcagtctgaggcatgaagcctctcctgctgatcac
tgctatgctggacctgaagatgtggcctgtgatgtctgcactgggagaaaactgaaagcc
ctaaagtcctgtctggtgtgtctggtctcttactgcgagaaacaccttcagcctcattat
gaattacctatatttgagaaacacaagctggtggagccgtccaagaatctccaggagaac
atctgctctcatcatgatgaggtgatgaagatattctgttgtactgatcagcagcttatc
tgttacctctgctctgtagatgaacataaaggccacgacacagtctcagctgcagcagaa
aggactgagaggcagaaagagctccaggggagtcgacaaaacatccagcagagaatccag
gacagagagaaagatgtgaagctgcttaaacaagaggtggaggctatcaatcactctgct
gataaagtagtggaggacagtgagaagatcttcactgagctgatttgtgtcatggaaaaa
agacgctctgatgtgaaacagcaggtcagattccagcaggaaactgaagtgagtcgagtc
aaagagcttcaggagaagctggagcaggagatcactgagctgaagaggaaagacgctgag
atgaagaagatctcagacacagaggatcacaaccagtttctacacaactactcctcactg
tcaccactcagtgaatctacagactcacccagcatcaatatccgtcctctgcgctacttt
gaggatgtgacagccgccgtgtcagaggtcagagataaactacaggactttctaaatgag
aaattgacaaacatttcactgactgtgactgaagcggatgttttattgtcaaatccacaa
ccagagcccaagaccagagctgacttccttaaatattcacgtgaaataacactggatcca
aacacagcacacacacagctgttattatctgaggggaacagaaaaggaacattaatttca
catccacagtctttttctagtcacccagacagattcactaaagagtttcaggtcctgagt
agagagagtctgactggacgttgttactgggaggtggagtggagaggtgaagtaatttat
gtagcagtggcatacaagaatgtcaccagagcaggcagctcgaatgcatgtagatttgga
ctcaatgacaaatcttgggcgataagatgtgacaataatagttttaaacttctgtacaag
aatgtccgaactcttgtcccaggtcctgtgtcctccagagtaggagtgtacctggatcac
agtgcaggtattctgtccttctacagcgtctctgacaccatgactctcctccacagagtc
cagaccacattcactcagcctctctacgctggacttagtttttttaccactactaaagac
gctgctgagttctgtaaactcaaatag
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