Saccharomycodes ludwigii: SCDLUD_000379
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Entry
SCDLUD_000379 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCDLUD_000379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slud03019
]
SCDLUD_000379
Messenger RNA biogenesis [BR:
slud03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SCDLUD_000379
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SCDLUD_000379
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
70105701
NCBI-ProteinID:
XP_045936716
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Position
I:complement(908865..911429)
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AA seq
854 aa
AA seq
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MAHRKLQQEIDRVFKKITEGLEVFDSYYERHEQCTNNPSQKEKLESDLKREVKKLQRLRE
QIKSWQSTPEVKDKDSLLTYRRNVEVAMEKYKAVEKGSKEKAYSNISLKKSEVLDPQQQA
IKDCSDYLSQSIEELDRQFDAAQLDIDKLKLLQKKRKTASASNEEEIEHLTLLQTRYKWH
QEKLEIALRLVANEELDPELIRNIEDDLCYYLETNRNADFVEDDSIYDALDLDSNEFIAA
EVRAAFENQQRSGTSASGINPDEGDQGIGSHTNGDGENGDIRTEPLDMSKLSKKEQRKLL
REQKQAAKLAAKAAAKAAEQSVQITVTEKSVREHSTTPSPLSKAATSIRSDDISEDTTGN
KDKSIFSKLKKKNVLNEDSSRQEVAATGIRPSTSSTVTSKQQTPITSKPSTAQTQLSSRS
VSPETSQGHQYIHQTLNGLTTTSTLKPAPPKSTGELKWAAAAAQAVHKDSIKPPATTLIS
LSNDSGSTISNASSSNVNSSSTTTAASKVNTPKSKNNTPSLSSISMNNNLSFSSSNPLID
IINNQKTNNIVKQQEATTNISNETVPEELIVDDYESEPSDDELDIDKQQIASMTLEESRQ
RFLVSQHLQTELLKPVNIDLIKLPAGLQDMVMSNFVYSNKLVPRDYLRTCINECAISRLS
ALPSNVKPPNAPMDIIRSIQQWDEARLSVPFFSENPDSNTVNISKDVLLTFHELDTFSLF
YAYYFALTPLENKIAEILLTERQWKCNIAGDTWFLSLGDAKFSNEMYEIRDFKIFKCDDW
TCVDKVNFKLDYSVLAHPQQQPNVNINNIHTANIPGNTSNNTNLDAVLSPKVHNIERSMS
NGQTLLQHLKGGLL
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggctcacagaaaacttcagcaggaaatcgatcgtgttttcaagaagataacggagggt
ttagaagtctttgatagttattacgaaagacatgaacaatgcacgaataatccgtctcaa
aaagaaaaattagaaagtgatttaaagagagaagttaaaaaattgcaaaggttgcgagag
caaattaaatcatggcaatctactccggaagtcaaggataaagattctcttttaacttat
agacgaaatgtggaagttgcaatggaaaagtataaggcagtagaaaaaggatcaaaagaa
aaggcttattcaaacataagtcttaaaaaatcagaagttttggatccacagcagcaggca
atcaaggattgcagtgattatctttctcaatcaattgaagaattagatagacagtttgat
gctgctcagttagatattgataaattaaaacttttacaaaaaaaaaggaaaactgcctct
gcaagcaacgaggaggaaatagaacatttaactctattacaaaccaggtacaaatggcat
caagagaaattggaaattgcacttagactagtggctaatgaagagttggatccggaactt
atcaggaacattgaagatgatttatgttattatttggaaactaatcgtaatgctgatttc
gtagaggatgattctatttacgatgccttggatttagactctaatgaatttattgctgca
gaagttcgtgccgcttttgaaaaccaacagcgttctggtacttctgcatctggcattaat
ccagatgaaggtgatcaaggcattggtagtcatacaaatggtgatggtgaaaatggcgat
attcgcacagaacctctggatatgagtaaattatcaaaaaaagaacaaagaaaacttctc
agagaacaaaaacaagctgctaaattggctgctaaagctgccgcaaaggctgctgaacag
tctgtgcaaataacagtcaccgaaaaatcagtacgtgaacattccacaacaccatctcct
ctatccaaagcagcaactagcattcgcagtgacgatatatcggaggatactacaggcaac
aaggataaatcaatattttctaagcttaaaaaaaagaatgtgctcaatgaagatagtagt
agacaagaagtagcagcaactggaattagaccctctacatcctccacagttacctcgaaa
cagcaaacaccaattacttctaaaccttcaacagcgcaaactcagttatcatcacgttca
gtatcgccggaaacatcacaaggccatcagtatatccaccaaacactaaatggtctaacg
acaacaagtactttgaaacccgctcctcccaagtcaacaggtgaattgaaatgggcagca
gcagcagctcaggctgttcataaggattctattaaaccaccagcaacaacattgattagt
cttagtaatgatagcggtagtaccataagcaatgcaagtagtagtaatgttaatagtagt
agtaccacaacggctgcttctaaagtcaatactccaaaatcaaaaaataatacgccatct
ctatcatccatatccatgaacaataatttatccttttcctcctctaacccactgattgat
ataatcaataatcaaaaaaccaataatatcgtgaaacaacaagaagctaccactaatatt
tccaacgaaactgtaccggaagaattaattgttgatgattatgaatctgaacctagtgat
gatgaactagatattgacaaacagcaaatagcgtcgatgactctggaggaaagtagacaa
agatttttggtatcacaacatttgcaaacggaactattgaagccagttaacatcgattta
atcaagttgcccgctggtttacaagatatggtcatgtccaattttgtttactcaaacaag
cttgtaccacgtgattacctaagaacatgtataaacgaatgcgccatttccagattgagt
gctttaccctcaaatgtgaagccacctaatgcaccaatggatattataagatcgatacaa
cagtgggatgaagctcgtttaagtgttccctttttttctgaaaatcctgattccaatact
gttaatatttcaaaagatgtgctactgacatttcacgaattggatactttttcgttgttt
tatgcctactattttgctctaacacctttagaaaataaaattgctgagattttgttgacg
gagcgtcagtggaaatgtaacatagctggtgatacttggtttttgagtttgggtgatgcc
aaatttagtaatgaaatgtatgaaatcagggattttaaaatattcaaatgtgatgattgg
acctgtgtggacaaagttaattttaaattagattattctgttttagcgcaccctcaacag
cagccaaacgttaatattaacaatattcatactgccaatataccaggtaatacctccaac
aacactaatttagatgctgtattatcaccaaaggtacataatattgaacgtagtatgagt
aatggtcaaactttattacagcacttgaaaggtggtttattatga
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