Saccharomycodes ludwigii: SCDLUD_000875
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Entry
SCDLUD_000875 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K07936
GTP-binding nuclear protein Ran
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03008
Ribosome biogenesis in eukaryotes
slud03013
Nucleocytoplasmic transport
slud03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SCDLUD_000875
03008 Ribosome biogenesis in eukaryotes
SCDLUD_000875
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
SCDLUD_000875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slud03019
]
SCDLUD_000875
03009 Ribosome biogenesis [BR:
slud03009
]
SCDLUD_000875
03016 Transfer RNA biogenesis [BR:
slud03016
]
SCDLUD_000875
03036 Chromosome and associated proteins [BR:
slud03036
]
SCDLUD_000875
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slud04147
]
SCDLUD_000875
04031 GTP-binding proteins [BR:
slud04031
]
SCDLUD_000875
Messenger RNA biogenesis [BR:
slud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
SCDLUD_000875
Ribosome biogenesis [BR:
slud03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
SCDLUD_000875
Pre-60S particles
SCDLUD_000875
Transfer RNA biogenesis [BR:
slud03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
SCDLUD_000875
Chromosome and associated proteins [BR:
slud03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
SCDLUD_000875
Spindle formation proteins
SCDLUD_000875
Exosome [BR:
slud04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SCDLUD_000875
GTP-binding proteins [BR:
slud04031
]
Small (monomeric) G-proteins
Ran Family
Ran
SCDLUD_000875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
G-alpha
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RNA_helicase
Pox_A32
ArgoMid
ATPase
AAA_7
SRPRB
AAA_16
TsaE
DUF815
AAA_24
AAA_33
AAA_22
Motif
Other DBs
NCBI-GeneID:
70106197
NCBI-ProteinID:
XP_045937182
LinkDB
All DBs
Position
I:2053977..2054630
Genome browser
AA seq
217 aa
AA seq
DB search
MAEQQQQIPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFFTNFGEIK
FDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRVCENIPIVLC
GNKVDVKERKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAGNPQLEFVASP
ALAPPEVQVDETLMKQYQQEMEQATALPLPDEDDADL
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaacaacaacaaattcctacttttaaattagttttagttggtgatggtggt
actggtaaaaccacctttgttaaaagacacttaactggtgaatttgaaaagaaatatatt
gctactattggtgttgaagttcatccattaagtttctttaccaattttggtgaaattaaa
tttgatgtttgggataccgctggtcaagaaaaatttggtggtttaagagatggttactat
attaacgctcaatgtgccattattatgtttgatgtcacttctagaatcacttataaaaac
gttccaaattggcacagagatttagttagggtttgtgaaaacatccctattgttttatgt
ggtaacaaagttgatgttaaagaaagaaaggtcaaagctaaaactattactttccacaga
aagaagaacttgcaatattacgatatctctgccaagtctaattacaactttgaaaagcca
ttcttatggttagcaagaaaattggctggcaatccacaattagaatttgtcgcttctcca
gctttagctccaccagaagttcaagtcgatgaaactttaatgaaacaatatcaacaagaa
atggaacaagctactgccttaccattgccagatgaggatgatgctgatttgtaa
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