Saccharomycodes ludwigii: SCDLUD_001107
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Entry
SCDLUD_001107 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
slud
Saccharomycodes ludwigii
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slud03016
]
SCDLUD_001107
Enzymes [BR:
slud01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
SCDLUD_001107
Transfer RNA biogenesis [BR:
slud03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
SCDLUD_001107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wyosine_form
Flavodoxin_1
Radical_SAM
Ste5_C
Motif
Other DBs
NCBI-GeneID:
70106429
NCBI-ProteinID:
XP_045937395
LinkDB
All DBs
Position
I:complement(2549805..2552096)
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AA seq
763 aa
AA seq
DB search
MLKLILEYLLYILSISLYLIHGGRVTIALAVIVGFNVYEYEKYQSKKNSNPPLVSKEEKP
ITKKKTCCGGKGGASCCSKNNKSNGKKCACSGGGGNYGKSKTVGSQGDEKKTTSSNVANN
SNSVEEIDFTNAFKKVSSKKNTTKKSPASLKNVKVSAKKNIPKSGLTVSNNLLDSQIYIL
YSTLQGAGERAANTVKERLGFLYPNDLKKEPIIVHLDEVNDLEDYFVNVPKNSIYIMVVP
SYDTDSPLDYSLETLDEISNDFRIDKYPLQKLVGFSVLGLGDSESWPEKFCYQAKQLDQL
LSTIGGRRIFPMGQICMKRDKWGAVEEWADLLGETLKDNEPILYEYDEDEQETSEPVVDL
EDIGKSEELDTTTKKMVSENSPTYKNLTKQGYTVIGSHSGVKICRWTKNDLRGRGSCYKH
SLFNIVSSRCMELTPSLACSSKCVFCWRHGTNPVSKNWRWEIDEPEYILEEGLKGHYSKI
KQMRGVPGVRADRFQKAFQVRHCALSLVGEPIMYPHINKFVELLHEKDISSFLVCNAQHP
SQLKAMRKVTQLYLSVDAPTKSELKKVDRPLYKDFWERMMECLDIIRTTQSHQRTVLRLT
LVKGFNMADVSSYADIVEKGLPCFIEVKGATFCGSSDGNGNPLTMQNIPYYEECVKFVES
LTEELNRRGLEYGVAAEHAHSNCILIASRKFYIDGEWYTHIDFDKFFELLRSDVPFTNVD
YIAKTPEWALFGSGGFAPDNVRFYRKKKDRNDDTKEQKQENVA
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaactgattctggaatatttactttatattttatccataagtttatatcttatt
catggcgggagagtcactattgcattggctgttatcgtcggattcaatgtttatgaatat
gaaaaatatcaatcaaagaaaaattcaaatccacctctagtgtctaaagaagaaaaaccc
atcaccaaaaagaaaacatgctgcggtggtaagggtggtgcctcgtgttgttcgaaaaac
aacaaatctaatggtaaaaagtgtgcttgtagtggtggcggtgggaattatggtaaatct
aaaactgttggctcacaaggagatgaaaaaaagaccacatcatccaatgttgctaataat
agcaacagtgttgaagaaattgactttaccaatgcatttaaaaaagtatcttcaaaaaaa
aatactactaaaaaatcacctgcttctttaaaaaacgtgaaagtatccgctaaaaaaaac
ataccaaaatctggtttaaccgtttccaataatttattagattcccagatttacatatta
tatagcactttacaaggtgctggtgaaagagcagcaaatacagtcaaagaaagattagga
tttttatatccaaacgatttgaaaaaagagcctattattgtccatttggatgaagttaat
gatttggaagactattttgtaaatgttccgaaaaactccatttacatcatggttgttcct
tcttatgatacagattctccattggattattctttagaaactttggatgaaatctctaat
gatttcagaattgataaatatcctttgcaaaaattagttgggttctcggtgctaggtctt
ggtgactccgaatcttggcctgaaaaattttgctatcaggctaaacaattggatcaatta
ctatctaccattggtggacgtagaatttttccgatgggccaaatttgtatgaaacgggat
aaatggggcgcagttgaagaatgggctgacttgttgggtgaaacattaaaagataacgaa
cccatactctacgaatatgatgaagatgaacaagaaacaagtgagccagtagtggatttg
gaagatatcggcaaatcggaagagcttgatactacgaccaaaaagatggtatctgaaaac
agtcctacatataaaaatttgacaaaacagggctacacagtcattggttcccattcgggt
gtaaaaatttgtagatggaccaagaatgatctaagaggtagaggttcgtgttacaaacac
tccttgttcaatattgtatcaagtagatgtatggaactaactccttccttagcgtgttcc
tcaaaatgtgttttttgttggagacacggaactaatccagtctccaaaaattggaggtgg
gaaattgacgagccagagtatattttggaagaaggtttaaaaggccattattctaaaatc
aaacaaatgagaggtgttccaggagtaagagccgataggtttcaaaaagcttttcaagtg
cgtcactgtgccttatctttagttggtgagcctattatgtatccacacattaacaaattt
gttgaactattacacgaaaaagatatttcaagtttccttgtttgtaatgctcaacatcca
tctcaactaaaagccatgagaaaagttacacaattatatctatctgttgatgcaccaacc
aaatctgaattgaagaaggtagacagaccgttgtacaaggatttttgggaaagaatgatg
gaatgtttggatatcataaggaccacgcaatctcaccaaagaactgttttaagactaact
ttggttaaaggctttaatatggcagatgttagttcatatgctgatattgtggagaaaggt
ttgccatgttttattgaagttaagggtgccactttttgtggttcatctgatggcaacggt
aatccgttaactatgcaaaatattccatattatgaagaatgtgttaaatttgttgaatca
ttgactgaagaactaaataggcgtgggttggaatatggtgtggctgctgaacatgcacat
tccaattgtattctgattgcgagccggaagttttatatcgatggggaatggtatactcat
attgattttgataaattttttgaattgttaagatcagatgtgccttttacaaatgtggat
tatatagccaagacaccggaatgggctttgtttggtagtggtgggttcgcaccggataac
gtgagattctatagaaaaaagaaagacagaaatgatgatactaaagagcaaaaacaagag
aatgttgcataa
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