Saccharomycodes ludwigii: SCDLUD_002119
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Entry
SCDLUD_002119 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03022
Basal transcription factors
slud03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SCDLUD_002119
09124 Replication and repair
03420 Nucleotide excision repair
SCDLUD_002119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slud03021
]
SCDLUD_002119
03400 DNA repair and recombination proteins [BR:
slud03400
]
SCDLUD_002119
Transcription machinery [BR:
slud03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SCDLUD_002119
DNA repair and recombination proteins [BR:
slud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SCDLUD_002119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
70107436
NCBI-ProteinID:
XP_045936228
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All DBs
Position
II:2049788..2051377
Genome browser
AA seq
529 aa
AA seq
DB search
MSTNNLFKATVLEYLEGLSQNVQSRLYESPAACLAIYRILPQLAKFLIMSMVFNHEDVLL
RDLNKWVKEQGQFEFDEAIKTMSSLHILKEISKNPVQVNLNPIFKNSFRNSLTGGEVHDS
FGIPVDDDGTITTESLDKYAADKWETILHFMVGTPGMKSPSETVLSLLLHSGLMLEEESD
YELKITNEGFQFLLQEINVQIWSLLLQYLKMAESIQMDPVEVLNFIFMLGSLELGQSYSV
KGLTETQKKLLKDMTDYGLIYQTTFNSLKFYPTRLAIILTSDSMTIRSASMAMNSVLKKA
ANYINYNDTAYNKNNTANTDADATNNLDKEDADAENNNGEEVDGNGSIVEGALIIETNFK
LYSYSNSPLQIAILGLFVHLKTRFANMVAGQVTRESIRRALRNGITAEQIIAYLETHAHP
QMVRLAENNLEKKLALDANCNETLEILPPTVVDQIKLWQLELDRITNYDGYLYSTFDTTE
EYQQLVTYANDIGVLIWKSDRKKVFFIENEGNSQVVEYAKRLLSRKDSI
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaacaatttatttaaagcaacagtcttagagtatttagaaggcttatcgcaa
aatgttcaatcaagattatacgaatcaccggcagcatgtttggcaatatatagaattcta
cctcaactcgcaaaatttttaattatgtcaatggtgtttaatcacgaagacgtattgctt
cgggatctaaataaatgggttaaagaacaaggtcaatttgaatttgatgaggctataaaa
acaatgagttccttgcatatattaaaagaaatttctaaaaatcctgttcaagtcaatttg
aatccaatttttaaaaatagttttagaaattcattaactgggggtgaagtacatgattcc
ttcgggattcctgtggatgatgatggtactataacaactgaaagtttggataaatatgca
gctgacaaatgggaaacaattttgcattttatggttggtactcctggaatgaaatctcct
agcgaaacagttttgagcttattattgcatagtggattaatgttggaagaagaaagtgat
tatgaactaaaaatcactaatgaaggtttccaatttttattacaagaaatcaatgttcaa
atttggtctttattactacagtacttgaaaatggccgagagtattcagatggacccggta
gaagttttaaattttattttcatgttgggctctttggaattgggacaaagttatagcgtt
aaaggtttaacagaaacacagaaaaaattattaaaagatatgactgactatggactaatt
tatcaaaccacatttaattcgctaaagttttacccaacaagattagctataattttaact
agtgatagtatgacgattagatctgcctcaatggcaatgaatagcgttctaaaaaaagct
gcaaattacatcaattataacgatactgcgtataataaaaataatactgcaaatactgat
gcggatgccaccaataacctagacaaggaagatgccgatgcagaaaataataatggtgag
gaagtggatggcaatggctctattgttgagggcgcattgattatagaaactaatttcaaa
ttgtactcgtattctaattcacctttacaaattgctattttagggttatttgtgcacttg
aaaacaagatttgctaatatggttgcaggacaggttactagagagtctattagaagagcc
ttgagaaatggtattaccgccgaacaaattattgcttatttggaaacacatgcacatccc
caaatggttcgtttagcagaaaacaatttggaaaaaaaacttgcgctagatgcaaattgt
aacgaaacgttagaaattttacctccaacggtagtagatcaaataaaattatggcaattg
gaattggatagaataactaattatgacggttatttatattccacttttgatactactgaa
gaatatcaacagctggtcacttatgcgaacgatataggagttttaatctggaaaagtgat
aggaagaaagtcttttttatagagaatgagggcaattctcaagttgttgaatatgccaaa
agactattgagtagaaaagattctatataa
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