Sphingomonas lutea: H9L13_00380
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Entry
H9L13_00380 CDS
T06880
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
slut
Sphingomonas lutea
Pathway
slut03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
H9L13_00380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slut03400
]
H9L13_00380
Enzymes [BR:
slut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
H9L13_00380
DNA repair and recombination proteins [BR:
slut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
H9L13_00380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Gly_transporter
Motif
Other DBs
NCBI-ProteinID:
QNN67468
UniProt:
A0A7G9SHZ3
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All DBs
Position
complement(71797..73185)
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AA seq
462 aa
AA seq
DB search
MDLPDDSRPGLLANVASGDNSPALSVSELSGALKRTIETAFGQVRVRGEISGFKRHGSGH
CYFTLKDESACIDAVIWRSSAAVLAFKPEDGAEVIATGKLTTFPGRSKYQIVIERLELAG
EGALLALLERRRKALAAEGLFDPARKRRLPYLPRVIGVVTSPTGAVIRDILHRLEDRFPT
HVILWPVAVQGDGAAARIANAIRRFPAIAPRPDLLIVARGGGSIEDLWPFNEEEVVRAAA
ESPIPIISAVGHETDTTLIDHAADLRAPTPTAAAELAVPVRAELAAHLSELGRRGHNCLS
RQAERARERLQLTACRWPEAPTLFTPVAQRLDELGERLPRALSARAGHARGDLNLVAGRL
RGDLVEQRVARLSERLAALWQMAELVHPERPLSRGFARVTDTAGVTMTSADAARSAGSVT
MHFADGRVDASVGPGGRPPPVERKRRANYMPPQPGLFDHGEE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggatctccctgacgacagccgacccggcctgttagcgaacgtcgcttcgggcgacaat
tcgcctgcgctaagtgtcagcgagctgtcgggcgcgctcaagcggacgatcgagaccgcc
ttcggccaggtccgcgtgcgcggcgagatttccgggttcaagcggcacggttcgggccat
tgctactttacgctcaaggacgaaagcgcgtgcatcgacgcggtgatctggcgcagcagc
gcggcggtgctggcgttcaagcccgaggacggggcagaggtcatcgcgaccggcaagctg
accacctttcccggccggtccaagtatcagatcgtcatcgaacggctcgagctggcgggc
gagggcgcgctgctcgcgctgctcgaacgacggcgcaaggcgcttgccgcggaagggctg
ttcgatccggcgcgcaagcgccggctgccttatctgccgcgcgtgatcggggtcgtcacc
tcgcccaccggtgccgtcattcgcgacatcctccaccggctcgaggaccgttttccgacg
cacgtcatcctgtggccggtcgcagtccagggtgatggcgccgccgcccgaatcgccaac
gccatccggcgctttccggcgatcgccccgcgtcccgacttgctgatcgttgcgcgcggc
ggcgggtcgatcgaggatttgtggccgttcaacgaagaggaggttgttcgcgcggccgcc
gaatcgccgatcccgatcatctccgccgtcgggcacgaaaccgacaccacgctgatcgat
cacgccgccgatcttcgcgcgccgacgccgaccgccgcagcggagcttgccgtgccggtg
cgtgccgagctcgccgcgcatctctccgagctcgggcggcgcggccacaattgtctgtcg
cgccaggccgagcgcgcgcgcgagcggctgcagctcaccgcctgccgctggccggaagcg
ccgacactcttcacgccggtcgcgcagcgcctcgatgagctgggcgagcgcctcccgcgc
gccctgtcggcgcgcgccggccacgcacgcggcgacctcaacctcgttgccgggcggctt
cgcggcgaccttgtcgaacagcgcgtcgcgcggctttcggagcggctcgccgctttgtgg
cagatggccgagctggtgcaccctgagcggccactgtcacgcggcttcgcacgggtcacc
gacacggctggcgtgacgatgaccagcgcggacgctgccaggtcggcgggatcggtgacc
atgcattttgccgacggccgcgtcgacgcctcggtcgggccgggcggtcggccgcccccg
gttgagcgcaagcgccgcgcgaactacatgcccccgcaaccggggctgttcgatcacggc
gaggagtag
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