Solanum lycopersicum (tomato): 101245068
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Entry
101245068 CDS
T02665
Name
(RefSeq) transcription initiation factor TFIID subunit 12b-like isoform X3
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101245068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sly03021
]
101245068
03036 Chromosome and associated proteins [BR:
sly03036
]
101245068
Transcription machinery [BR:
sly03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101245068
Coactivators
SAGA/TFTC/STAGA complex
101245068
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101245068
STAGA complex
101245068
TFTC complex
101245068
SAGA complex
101245068
SLIK complex
101245068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
CBFD_NFYB_HMF
TFIIA
Chon_Sulph_att
Motif
Other DBs
NCBI-GeneID:
101245068
NCBI-ProteinID:
XP_010322827
LinkDB
All DBs
Position
6:39808990..39818772
Genome browser
AA seq
305 aa
AA seq
DB search
MMAGLMQSSLCHFRGQSFQGCRQWETGNIGISQFELSTQGTSGPCICPTKDEQRSTTEDV
VSANFPHHQSEELSQTAQPAQQQLGYPQMHQNQQLQQQQQQPQQVLHQQQSSPAMNSPGG
HNLLSLTGSEPDATGSGTTTPGSSSSQGAEASNQFLGKRKIQDLVSQVDPQGRVDPEVEQ
FLLEIADDFIDSVTTFSCNLAKHRKSSTLESKDILLHLEKDWNLTVPGFSSEDKKHCPEH
SSGDLCKERLEMIPDMMEASPQAEASTSSSAKEIVSPGLGDQVGSTDIIGPPSSEELASP
SNGEI
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaggattgatgcagtcttctctgtgtcatttccgtggacagtcttttcaggga
tgcaggcaatgggaaactgggaatattgggatctctcaatttgagctctcaactcagggc
acatcgggtccttgcatatgcccaacaaaggatgaacaaaggtcaactacggaagacgtt
gtctcagcaaacttccctcatcatcagtcagaagagttatcgcaaactgcacagccggca
caacagcaattggggtatccgcagatgcatcagaatcagcagctccaacagcaacaacaa
caacctcagcaggttttgcatcagcagcaatcttctccagcaatgaattcccctggtggt
cataatttactgagtttgactggatcagaaccagatgccactggatctgggacaacgact
cctgggagtagttcaagccagggggctgaagcaagcaatcagtttcttgggaagagaaag
attcaggatttagtttcacaggtggatcctcagggaagagttgatcctgaagttgaacag
tttcttttagagatcgctgatgactttattgattcggttactacattttcttgcaatttg
gcgaagcatcggaaatcttcgactctggagtccaaagatatactgttacatttagagaaa
gattggaatttgactgtcccaggtttttcaagtgaggataagaaacactgccctgaacat
tcatcaggtgatctctgcaaagagcgtttggaaatgatacctgatatgatggaggcttca
ccacaagctgaagcaagtacaagcagcagcgcgaaggagatcgtaagtccagggctgggt
gaccaggttggttcgactgacataatcggaccaccaagttcagaggaattggcttcacca
tctaatggtgaaatatag
DBGET
integrated database retrieval system
