Solanum lycopersicum (tomato): 101246966
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Entry
101246966 CDS
T02665
Name
(RefSeq) cyclin-H1-1
KO
K06634
cyclin H
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03022
Basal transcription factors
sly03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101246966
09124 Replication and repair
03420 Nucleotide excision repair
101246966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sly03021
]
101246966
03400 DNA repair and recombination proteins [BR:
sly03400
]
101246966
Transcription machinery [BR:
sly03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101246966
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101246966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
TFIIB
RB_B
IAT_beta
Motif
Other DBs
NCBI-GeneID:
101246966
NCBI-ProteinID:
XP_004230215
LinkDB
All DBs
Position
1:89480899..89486945
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AA seq
328 aa
AA seq
DB search
MADFMTSTHKTKWIYTLQDIKHKYKVANQRAKQALEMFGTTRMEVDIDGTFSYAESQNDT
KDNAEKRPKPLKVEEEQLLRAFYEFKIQDVCDAFKFPRKIQATALIYFKRFYLLWSVMEH
HPKDIMLTCIYAACKAEENHVSAEELGKGIGQDHHVILNNEMLVFQSLGFDLIAYAPYRA
LEGFISNLEEFCGAQDNDQLLALKGALDTARIEADKIMRSDGPLLFPPGQLALTALHRAD
AAHGIFDFERYLRSVLSHHDQPGHAISELTDSINVIDSLVGKLLTPTSKDVKHIDRKLKS
CLDPGSHDKSKKRKHRSKDSSNEVTDIS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcggatttcatgacatctactcataaaaccaagtggatttatactctccaagatatt
aaacataagtacaaagttgctaatcaaagggcgaaacaagcactagagatgtttggaaca
actcgaatggaagttgatattgatgggactttctcgtatgctgaaagtcaaaatgacaca
aaagataacgctgaaaagcgtcctaaaccactcaaagttgaagaagaacagcttctaagg
gctttctacgaattcaaaattcaagacgtttgtgatgcctttaagttccctcgtaagatt
caggcaacagccctcatttattttaagaggttttatctgctgtggtccgtgatggaacat
caccccaaagacattatgttaacgtgcatatatgcagcttgcaaggcagaggaaaatcat
gtatcagctgaggagcttggtaaggggattggacaggatcatcatgttatcctcaataat
gagatgctggtttttcagagtctaggatttgatcttattgcttatgctccatatcgtgca
ctcgaaggttttatcagtaatttagaggagttctgtggagctcaagataacgaccagctt
ctggcactgaagggtgcacttgatactgctaggattgaagcagataagattatgcgtagt
gatggaccacttctattcccacctgggcagttggcattgacagctctgcatagagctgat
gcagcgcatggcatattcgattttgagaggtacttgagaagtgtcctatcacatcatgat
cagccaggtcatgccatttcagaacttactgattctataaacgttatcgattctttggtt
ggtaaacttttgactccgacttccaaagacgtgaagcacattgatcggaaactcaaatca
tgtcttgatccgggttcacatgacaagagtaaaaaaaggaagcatagatccaaagatagc
tcaaatgaggttacagacatctcttga
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integrated database retrieval system