Solanum lycopersicum (tomato): 101248624
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Entry
101248624 CDS
T02665
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Module
sly_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101248624
Enzymes [BR:
sly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
101248624
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
NosD
Motif
Other DBs
NCBI-GeneID:
101248624
NCBI-ProteinID:
XP_004248938
UniProt:
A0A3Q7IF07
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Position
10:41351122..41353713
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AA seq
392 aa
AA seq
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MTSKCCFTIGVILGLVFVCTNAQEKVFNVLSYGAKADGMTDDSEAFLNGWRDACIWNGNG
TLLIPSGVYMINGAVFKGPCNGSVTTFEMKGVIKAPTDPNIFCNTGSWIAFQYIHGLDIK
GHGTFDGQGDCAWGKHQCETLPHTLALNFVHNFVVHDIHSINSKGVHVKVFQSNNARFRH
VQIAAPENSPNTDGIHISYSTNMHIADSNIGTGDDCISIIDGSQSINITGITCGPGHGIS
IGSLGKLSKPKIVKDIHVKNCTLINTQNGVRIKSWASTITGMATNIIFDDITIIKASNPI
IIDQHYCPERNCSGSTQESCVQIKDVTFNNIRGSSSSKAAVSLDCSATYPCKGIMLNDIN
LEYDAPDGPAISTCAHANGKATGTELPPSCLN
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaaagtgttgtttcacaataggcgttatattaggccttgtttttgtatgcaca
aatgctcaagaaaaggtcttcaatgtcctttcttatggtgctaaagcagatggaatgacg
gacgatagtgaggcatttttgaatggttggagggatgcatgcatatggaatggaaacggg
acattgttgataccttcaggggtatatatgataaatggtgcagtctttaaaggaccatgt
aatggatctgttacgacctttgaaatgaaaggagttattaaagctccaactgatcctaat
atattctgcaatactggttcttggattgcttttcaatatattcatggcttagatattaaa
ggacatggaacatttgatggacaaggggattgtgcttggggaaaacatcaatgtgaaact
cttccccatacacttgcattaaatttcgtccataatttcgtggtgcatgacatacattca
atcaatagcaagggtgtacacgtcaaagtctttcaatccaataatgccagatttaggcat
gttcaaatagcggcgccagaaaacagccctaacaccgatggtattcatataagctactca
acaaacatgcatatcgccgattcaaatattggaactggagatgattgtatatctattatc
gatggtagtcaaagcatcaacattactgggatcacttgtggccctggccatggaataagc
atcggtagcttaggtaaactatctaaacctaaaattgtgaaggatatacatgtcaaaaat
tgcactttgatcaacactcaaaatggggtgagaattaagagttgggcctcaacgataacc
ggtatggctacaaatataatatttgatgatattaccattataaaagcctcgaatcctata
ataatcgatcaacattattgtccggagagaaactgtagcggtagcacacaggaaagttgt
gtgcaaatcaaggatgtgacattcaataacataaggggatcttcaagttcaaaagcagca
gttagtttagattgtagtgctacatatccttgtaaaggaattatgcttaatgatatcaac
ttggaatatgatgcccctgatggtcctgcaatatcaacatgtgctcatgccaatggaaaa
gcaacaggcaccgaattacctccaagttgtttaaattaa
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