Solanum lycopersicum (tomato): 101250723
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Entry
101250723 CDS
T02665
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
KO
K05610
ubiquitin carboxyl-terminal hydrolase L5 [EC:
3.4.19.12
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101250723
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sly01002
]
101250723
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101250723
Enzymes [BR:
sly01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101250723
Peptidases and inhibitors [BR:
sly01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
101250723
Ubiquitin system [BR:
sly04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
101250723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
DNA_repr_REX1B
HTH_63
Trehalose_PPase
DUF6779
DUF1690
Motif
Other DBs
NCBI-GeneID:
101250723
NCBI-ProteinID:
XP_004246255
LinkDB
All DBs
Position
9:16845225..16853009
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AA seq
334 aa
AA seq
DB search
MSWCTIESDPGVFTELMQQMQVKGVQVEELYSLDLDELNSLRPVFGLIFLFKWRPGEKDD
RLVIKDPNPNLFFASQVINNACATQAILSILLNSPDVDIGPELSALKEFTKNFPPELKGL
AINNSEAIRTAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPIS
LGPCPGGQGDIEWLRMVQPVIQERIERYSQSEIRFNLMAVVKNRKEVYTAELKELQKRRE
RILQQLAASQSERVVDSSQVESLNKSLAEVNSGIEAVSDKILREEEKFKKWKTENIRRKH
NYIPFLFNFLKILAEKKQLRPLIEKAKQKTTNPR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggtgcactatcgaatctgatcctggggtttttaccgaacttatgcagcagatg
caagtaaaaggtgtgcaggttgaggagttgtattctttggatcttgatgagctcaacagt
cttaggcctgtgttcggtttgatattccttttcaaatggcgtcctggtgaaaaagatgat
cgccttgtgatcaaggacccaaacccaaacctattctttgctagtcaggtgataaacaat
gcttgtgctacccaagcaatcctttcaatcctcctgaacagtccagatgttgatattggc
ccagaattatctgcactaaaagaattcacaaagaatttcccaccggagcttaaaggttta
gctatcaataacagtgaagcaattcgcacagcacataatagttttgcaagacctgagcca
tttgtgcctgaggagcagaaagctgctggcaaagatgatgatgtgtatcattttatcagt
tatatacctgtggacggtgtgttgtatgagcttgatggattgaaggagggaccaatcagt
cttggaccatgccctggtggacaaggtgatattgagtggttgcgcatggtgcaaccagtt
attcaggaacgtattgagaggtattcccaaagtgaaataagattcaatctgatggctgta
gtaaagaacaggaaagaggtgtatactgcagagctgaaggagcttcaaaagaggagggag
cgtattctgcagcagctggctgcatcccagtcggagagagtggtggatagcagccaagtg
gaatcactaaataaatccttagcagaggtaaattctggtattgaagctgttagtgataag
atattgagggaggaggagaagttcaagaaatggaaaactgaaaatatccgtcggaagcac
aactatataccatttctgttcaactttttgaaaattctagctgaaaagaagcagctgaga
cctcttatagagaaggccaaacagaaaaccaccaatcctagatga
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