Solanum lycopersicum (tomato): 101255404
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Entry
101255404 CDS
T02665
Name
(RefSeq) uncharacterized protein LOC101255404
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101255404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sly03036
]
101255404
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
101255404
Chromatin remodeling factors
NuRD complex
101255404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chromo
SNF2-rel_dom
Helicase_C
PHD
ADDz_Dnmt3b
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
101255404
NCBI-ProteinID:
XP_019069916
LinkDB
All DBs
Position
6:complement(5383876..5434098)
Genome browser
AA seq
2731 aa
AA seq
DB search
MASETRSGRKNKDTKSNKSKNKQSDKGSLSSGSGKTDGSNVRRSSRETKQVASSPSSIRK
SKRLEKQSPTPPIVKRRAALIKKPNSPSPLRRSDRGKKHTLSSSSRSNYVGIEFDSSSVK
KEKKEKSVKELIMESERYNTSKENGESSVGLKRKRMDARSYKALFKMQRKRYTTENNDKL
ESPKKPSRVDSIACDETDCKLINGGNESHQGVVNELKEHPDEVASARSISSLEASAADAS
VNDVVELPYLKLKEHPDAVASARSISSLEASAADASVNDVGELPYSKLKEHSDEVASASS
ISSLEASAADASVNDVGELPYSKLKEHPDGVASARSISSLEASAADASVNDVGEMPLSNR
RCCSTEKSVALPAENGSGVSKNGCTVGEISGDSGRLPESCSVPGNNLHIAGLTCSTSTDG
DIILKSGELGTGNCPETHNDTCDLAEVFPPPLGDLEKLGYSGACASCSRQIRLNHDSAEE
ELCSCAGTGRVSSNLSSLEVRAFRCGEDGVCSEAAILLDSGERCNIQLNEALSVSQRGSD
ERMCAICKQAGKILICDGRGCKRCYHLSCLDPPLDDFPPGAWHCTLCVKKKIESGVHSVT
EGVESILDVREVEVADAKGTHRQKQYLVKYHGLAHAHNHWVAEAQLLIDAPLLIANYNHK
NQDVRWISEWTVPHRLLKKRSLMLSKLHGPEAGENNKCLFEWLVKWKGLGYEYATWELGN
SNLLNSQHGESLIEDFNIRRKKAKRRIDKNQKGQLVKLSTLPAGGSLITDSNLLNNVNKL
RECWFKCQNTTVVDDKDRIMKMVLFILSLSDVCCPFLIVTTSSSLPQWEAEFTRLAPSID
VVVYSGSRDYRRRIKSLEFYDEGGFMMLQVLLSSLEFAIEDVEILRSLSWEVTIIDDCQN
VGISGHVEQIKMLATGVRVLLFNGPMKITSSEYLNLLSLLECKIGVDKTGGLESDFNEHL
GKLKRVTKVTAPCSKPESSKFVEYWVPVQISDLQLEQYCATLLTNSTALRTFTKSDPVGT
LRDILLSVRKCCDHPYILDPLLQPFNKGLSPAEMLEVGIKASGKLQFLDKMLTELRLRQH
RVVVLFQSIVGSGSGASIGDILDDFLRQRFGEDSYERVETGVVMSKRQASLHRFNNKESG
RFVLLLENRVCNSSIKLPSVDNVIIYDSETNPANDLRQLQKLSIDSESKYISVFRLYSCF
TVEERALVLAKQDINHDSNLHSVSRSPNNSLMWGASNLFSRLDEYHTGGIPTTISNNSSG
QLLLNDIISEFSAIISKSSDNKDTCHSIISKVQMSTGTYSASIPLLGEKKMELKIGVEPQ
VFWRGLFEGRNPEWRNLSRATPRNRKRVQYFDESPDPPNGDDEAGKKRRKVVNHSVDAIP
GHPSPGRGEVAASKGGAHENDDIGGEHVSRSPSHLLHEAKPVRPEEGRMLYNEQKSLHVH
LKAEFAKLFEVLKLSDAVKHTVGKFLEYVMENHRVSREPATILQAFQLSLCWVAASILKQ
KIDKEETFLLAKQYLQFGCTEEETNNVCLKIRSLKKLFLQQLDQNNNASSSSKCSLLATR
TVAEKPSTGSMSQVVESPQLNVLKEMEERLQGKKLHGECIVTPKKELVDIERETFIKEVQ
CRCERRMSNLVQKQKEEIEEFQKIWEKKKEELVQDYRLQVAVLRTVRGNTAVMKDKKKDA
ETEFSRKMQELKYNKDQKLNELEVEHSAMKNKERQKASLWLAEANSFRGVGSHPIDGIGC
SQENVNVSLNSPKTVHPVTGHHVKELNAGKILDNTRSDVPPSTSDESDILPIDSTSVLTT
PATEDQSGVKSVDGGLVTISKGSYEVGDPDVPSSTYDELNILPIEATNVLTMPAMEEQVE
IVSTAEVLVAKSNQLGPNEGGDLCYSSEGIGALGARSKKPNEVDYPDLPASTSNESNILP
VETSNVLTTPAMEKQLEIASTVGALVAKSNQPNEVGDFGGSSEEIGALSASSKQAIEVGD
PDVPASTSNVSNILPIEGSNVLTMTAAEEQVEITSSTGALVARSKRPNEVGDSGGSSAEI
VSVFPLPHEEHTEVLLGDPPREHLSEVSGLGFDVVLGNDNLEVNVTKELNTEHDSLENNS
HMQSDKDDPRDAVRSTDTNPISPLKLVVDLPSVEAVLCSDDGSLAQNQSSGDNLSHEMPL
PENQRGTQLEVDAGQYGTISSDAALISSSEQQQPASDGFLLAAHDPLSDIMHDTHNDGRS
FMPNLGSSHHLDGETMEPLQADGNSDEDQSVDVENFSEVSRVDPRPISEHGASSHNIGTP
VQVPGSTELPSQAVLQRNSYAAVVQGPRNIPVHPDHQMATWNSTLPFNADPLHKDWERIN
KEREQSTKILEDMKLRLRSDCEKEIEEMIAQIRKKYDHKLQEAEAAFLRKKKELDVNQIK
VLMNKLLADAFRCKCMNLKPSGFSGMRQVVPSSYLQHLHQVSQQPNLRSSPVTGSSSASQ
QSSVPVSLRASSITSLPSAGQAKVRQETSVPSNRSVHSGCISQPTVRCTPVTGLSLAGQP
APTQQTVAVSRSTTHSAGTPGRPPLICAITPSTGNLRVASEIRAPAPHLQPFKTLSSMSS
SNSPSTLAHSMQNHPQSPYMAASSPSVPQLPSLQTSSPSPSQCPQHQIPIPLVPQLAVDL
SSSRNVPPQHDIGGLPATRNPSISAQELLFNVENQPHANKPSIMPPLPDVNPDFDLLDLS
DFQTLDSVHGVPTSSAGATYVTDVVCVSDDD
NT seq
8196 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgaaactcggtctgggaggaaaaataaggatactaagagcaataaatcaaaa
aataaacagtctgataaaggttcattaagttctggctctgggaagacagatgggtccaat
gtaagaaggtcaagtcgagaaacaaagcaagttgcttcaagcccatcaagtataaggaag
tcgaagcgtcttgagaagcagtcaccaaccccgcctattgttaagaggagagctgcatta
attaagaaaccaaattctccaagccctttaagaaggtctgacaggggtaagaaacatacc
ttatctagctcgtcaagatcaaattacgttggaatagaattcgattcatccagtgtcaag
aaggaaaaaaaagagaaaagtgtgaaggagctgataatggaatctgaaagatataacact
agcaaggagaacggtgaatcttcggttggcttgaaaaggaagagaatggatgcacgtagt
tacaaggcactgttcaaaatgcaaagaaagagatatactacagaaaataatgacaagttg
gaaagcccaaagaagccatcaagagttgatagcattgcctgtgatgagacagactgcaag
ctaatcaatgggggtaatgaatctcatcaaggagttgtaaatgagttgaaggaacatcct
gatgaggttgcttctgcgaggtccatttctagcttagaagcttctgctgcagatgcttcg
gtaaatgatgtagtggaattgccatatttgaagttgaaagaacatcctgatgcggttgct
tctgccaggtccatttctagcttagaagcttctgctgcagatgcttcggtaaatgatgta
ggggaattgccatactctaagttgaaagaacattctgatgaggttgcttctgcgagttcc
atttctagcttagaagcttctgctgcagatgcttcggtaaatgatgtaggtgaattgcca
tactcaaagttaaaagaacatcctgatggggttgcttctgccaggtccatttctagctta
gaagcttctgctgcagatgcttcggtaaatgatgtaggggaaatgccactttcaaatcgc
agatgctgttctacagaaaaatctgttgctcttcctgctgaaaatggttcgggagtatct
aaaaatggctgcacagtgggagaaatttctggagattccggaaggttaccagagagctgc
tctgtgcctgggaataatttgcatattgctgggttgacgtgttctacttctacagatggt
gatattatcttgaaaagtggtgaactaggcactggtaattgtcctgagacgcataatgat
acatgtgacttggctgaagtgtttcctccaccactaggagatcttgaaaagcttggttac
agtggggcttgtgcttcatgctctagacagataaggttaaatcatgattcagcagaggag
gagttgtgctcatgtgctggaacaggcagggttagtagtaacctttctagtctcgaggtt
cgtgcctttagatgtggagaggatggagtttgttctgaagctgcaattcttttggattct
ggagaaagatgcaatatacaattgaatgaggccctttcagtttctcaaaggggcagtgat
gaaagaatgtgcgccatatgcaaacaagctggaaagatactgatctgcgatggaagaggt
tgcaagagatgctatcatctctcttgcttagatcctccactagatgattttccaccagga
gcttggcattgtactttgtgtgtcaagaaaaagattgaatctggtgtacattcagtgact
gaaggagtagaatcaattttggatgttagagaagtggaagtagcagatgccaaaggaacg
cataggcagaagcagtatcttgttaaataccatggtcttgctcatgcacacaatcattgg
gttgcagaggcacaattgcttattgatgcaccattgctcattgcgaactataatcataag
aatcaggatgtaaggtggatctcagagtggacagtgccacatcgtctcttgaagaaaaga
tcactgatgttatccaagctgcatggtccagaggcaggtgaaaataacaaatgcctgttt
gaatggcttgtgaaatggaagggccttggctatgaatatgctacatgggaattggggaat
tctaatcttctgaactcacagcatggtgaaagcctcatcgaggatttcaatattcgtcgc
aaaaaggcaaaaaggagaattgacaagaatcagaaggggcaacttgtcaaactatcgaca
cttcctgctggaggttcacttataacagattctaatctgctgaacaatgtgaacaagcta
cgcgaatgttggtttaagtgccaaaacaccactgtcgttgatgacaaggaccggataatg
aagatggttttgtttattctatctttgtccgatgtctgctgtccttttcttattgtcaca
acttcaagttcacttccccagtgggaagctgaatttacacgactggcaccaagtattgat
gttgtagtgtacagtggaagtagagattataggaggagaatcaagtcattggagttctat
gatgaaggtggtttcatgatgcttcaagtacttttatcatctctggaattcgccattgag
gatgtagaaatattgcgcagcttgagttgggaagtgactattattgatgactgccaaaat
gtaggaatttctggtcatgtggagcaaattaaaatgcttgctactggcgtaagggtgctt
cttttcaatggtccaatgaagatcacctcatctgagtatcttaatctactctcgttgctc
gaatgtaaaattggcgtggacaagactggtggcctggaatctgacttcaatgagcatctt
ggaaaactgaagagagtcacaaaggtcactgcaccttgcagcaagcctgaatcttccaag
ttcgtggagtattgggttcctgttcagatttctgacttgcagcttgagcagtattgtgct
acattactcacaaattctactgctcttcgcactttcactaaaagtgatcctgttgggact
ctccgtgatattcttctctctgtgcgaaagtgttgtgatcatccatatattctggatcct
ttgctgcaacccttcaataaagggctttctcctgctgaaatgctggaagtaggaataaaa
gcaagtggaaaactacaattccttgacaagatgctcacagagttgagactccgacaacat
agagtggttgtcctttttcagtctattgttggctctggctcgggggcatctattggtgat
attctggacgattttctgcgtcaaaggtttggtgaagattcttatgaaagagttgagaca
ggtgttgttatgtccaagagacaagcttcacttcacaggtttaacaacaaagaaagtggg
cgctttgttcttttactagagaatcgtgtttgcaattcgagcattaaactaccgtcagtt
gataatgttattatatatgacagtgagacaaatcctgcaaatgatttgagacaactccag
aagttatccatagattcagagtctaagtatatcagcgttttccgactgtattcatgtttc
actgtagaagaaagagcccttgtccttgctaaacaggacataaatcatgatagtaacttg
catagcgtaagtcggagccccaataactcccttatgtggggagcctcaaatttgttcagt
agattggatgagtaccacaccggaggcattccaaccacaatttcaaataactcatcaggg
cagttgcttttaaatgacattattagtgagttttctgcaataatttctaaaagctctgac
aacaaggacacatgtcattccattatttcaaaagttcaaatgagcacaggaacttacagt
gctagtatcccgctgcttggtgagaaaaaaatggagttgaaaatcggagtagaacctcaa
gttttttggagagggctgttcgaaggaagaaatccagagtggagaaatttaagccgagca
accccaaggaacagaaagagagttcaatactttgatgaatcaccagatccacctaatggt
gatgatgaagcaggaaagaagcgcaggaaggtggtaaatcatagtgtggatgcaatcccc
ggtcacccctcacctggaagaggtgaagttgcagcctccaaaggaggtgctcatgaaaat
gatgatattggtggggagcacgtttctaggtctccatctcatctgttgcacgaggcaaaa
cctgtcaggccagaagaagggagaatgctgtacaatgagcagaaaagccttcatgtccat
ctgaaagctgagtttgcaaaactgtttgaagtgctaaaactttcggatgctgtcaaacat
acagtgggtaagtttctggaatatgtgatggagaatcatcgtgttagtagggaacctgca
acaattttacaagctttccagttatctctgtgttgggttgcagcttcaatcttaaagcaa
aagattgacaaagaggagacattcttgctagccaagcagtacttacaatttggatgcact
gaagaagagacaaacaatgtctgtctgaagatccgttccttgaaaaagttattcctgcaa
cagttggatcaaaataataatgcttcaagttcttctaagtgttctttattagctaccaga
accgttgcagaaaagccatcaacaggaagcatgtcacaagttgtggaatctccccagctg
aatgtgctaaaggaaatggaagaaagattgcaaggtaaaaagttacacggggaatgcatt
gtgacacctaaaaaagaacttgtggatattgaacgggaaactttcattaaggaagtccag
tgtagatgtgagaggcgaatgtcaaacctggtacaaaagcaaaaggaggaaattgaggag
ttccagaaaatatgggaaaagaagaaggaagagcttgtgcaggattacagattgcaggtt
gctgttcttcggactgtacgtggtaacactgctgtaatgaaggataaaaaaaaagatgca
gaaactgaattttcaagaaaaatgcaagagctcaaatacaacaaggaccagaaacttaac
gagcttgaggtagaacactctgctatgaagaacaaggaaaggcaaaaggcttctttgtgg
ttggccgaagcaaattcctttaggggtgttggatctcatccgatagatgggatagggtgc
tctcaggaaaatgtaaatgtctcactcaattctcccaagactgttcaccctgtaactgga
catcatgttaaggaactgaatgcaggtaaaattttggataacacgcggtctgatgtacct
ccatctacttctgatgagtcggatattcttcctattgattctacaagtgttttaacaact
ccagcaacagaggaccaatctggggtcaagtctgtcgatggaggattggttactatatcc
aaggggtcttatgaagtgggtgatccagatgtaccttcatctacttatgatgagttgaat
attcttcctatagaagcgacaaatgttttaacaatgccagcaatggaggagcaagttgag
attgtgtccacggctgaagtgttggttgctaaatccaatcagctagggcctaatgaagga
ggtgatttatgttatagttcagagggaattggagcactgggtgctagatccaagaagccc
aatgaagtagattatccagatctaccagcatctacttccaatgagtcaaatattcttcct
gttgaaacatcaaatgttttaacaacgccagcaatggaaaagcaacttgagatcgcgtcc
acagttggtgcattggttgctaaatccaaccagcccaatgaagtaggtgattttggtggt
agttcagaggaaattggagcattaagtgctagttctaagcaagctattgaagtaggtgat
ccagatgtacctgcatctacttccaatgtgtcgaatattcttcccattgaaggttcaaat
gttttaactatgacagcagctgaggagcaagttgaaatcacttctagcactggagcattg
gttgctagatccaagcggcctaatgaagtgggtgattcaggtggcagttcagcagaaatt
gtttctgtgtttcctctgcctcatgaagaacatactgaggttctattaggggatccgcct
agagaacatttgtcagaggtatctggactgggttttgatgttgttctggggaatgataat
ttagaagtaaatgttactaaggaattgaatacggaacatgatagtctggaaaataattct
catatgcaaagtgataaagatgacccgagagatgcagttcgatccactgatacaaaccca
atttctcctctgaaattggtagttgacttgccttcggtagaagcagttctttgttctgat
gatggttctttagctcaaaatcaatcttcaggagataatctctctcatgagatgccactt
ccagaaaatcagaggggaacacaattggaagttgatgccgggcagtatggaaccatcagt
tctgatgctgcgttaattagtagttctgagcaacagcagccagcttctgatggttttctg
cttgctgctcacgatccactgagcgacattatgcatgatacccataatgatggaaggagc
tttatgccaaaccttggatcttctcatcatttggatggggagacgatggaacctttacag
gcagatggtaattcggacgaggatcaatctgttgatgttgagaatttctcagaagtcagt
agagtggatcctcgaccgatttcagaacatggtgcatcttcccataatattggaactcca
gttcaagtgccaggttccactgagcttcctagtcaagcagtcctgcaacgtaacagttat
gctgctgttgttcaaggacccaggaatataccagttcatcctgaccatcagatggccact
tggaattctactcttcctttcaatgctgatcctctgcacaaagattgggaaaggataaat
aaagaaagagaacaaagcaccaagatacttgaggacatgaaattgcgtctgagatctgat
tgcgagaaggagatagaggaaatgattgcccaaatccgtaagaaatatgatcataaactt
caggaagctgaggcagcatttcttaggaagaagaaagaacttgatgttaatcagatcaaa
gttctcatgaataagctcttggcagatgcttttagatgcaaatgcatgaatcttaaacct
tcggggttctcaggcatgcgtcaagttgtgccttctagttatttgcagcatctccatcag
gtatcccagcagcctaatttgaggtcttctcctgtgactggttcatcttcagctagccaa
caaagttctgtcccagtttctttgagagcttcctctatcaccagtttgccttcagctggc
caagcaaaggttagacaggagacttctgtcccctctaatcgttcagttcattctggttgt
atttctcagcctacagtaagatgtacaccagttactgggttatctttagctggccaacct
gcacctactcagcagacagttgctgttagtcgttcaacaacacattctgcaggaactcct
ggcaggccacctctcatctgtgcaattaccccttccactgggaatcttagggtagctagc
gagatccgtgctccagccccccatcttcagcctttcaagactctttcatccatgtcttct
agcaacagtccttcaacccttgctcatagtatgcaaaatcacccgcagtccccttacatg
gctgcatcatcaccctcagttccccaattaccttctctacaaacatcatcaccatcccca
tcccaatgtccgcaacatcagatacctataccgttggttccacagttagctgtagatctt
tctagttctcggaatgtgcctccgcagcatgatattggtggattgcctgctacacgaaat
ccgtctatatctgctcaggaattgctttttaatgtggagaatcaacctcatgcaaacaag
ccgagcattatgccacctttaccagatgtgaaccctgactttgatttattggacctatct
gattttcaaacactggatagtgtacatggagttcctacttcctcagctggagctacttat
gtaactgatgttgtctgtgtgtctgatgatgactga
DBGET
integrated database retrieval system
