Solanum lycopersicum (tomato): 101256820
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Entry
101256820 CDS
T02665
Name
(RefSeq) ATP-dependent DNA helicase At3g02060, chloroplastic isoform X1
Organism
sly
Solanum lycopersicum (tomato)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CarD_TRCF_RID
TRCF
RecG_dom3_C
Motif
Other DBs
NCBI-GeneID:
101256820
NCBI-ProteinID:
XP_004231740
UniProt:
A0A3Q7FCD3
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Position
2:55763438..55781281
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AA seq
826 aa
AA seq
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MAAAKASLFFSPSECFLTTRLCKLFSTTQKPSFPSPSSSSITLTNVLNADAVHTKLPPRL
RNARQEQERDAISLLNERIRREHAKRDHSPLRPAMDSEEADKYIQLVKEQQQRGLQKLKS
DRARQGAPHDAAQPTFSYKVDPYTLRSGDYVVHRKVGIGRFVGIKFDVPKDSKEPIEYVF
IEYADGMAKLPVKQASRLLYRYNLPNETKRPRTLSKLSDTSAWERRRMKGKVAVQKMVVD
LMELYLHRLKQKRPPYPKTPAMAEFASQFPFEPTPDQKQAFSDVERDLTESENPMDRLIC
GDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFDVISERFSRYPNIRVGLLSRF
QTKSEKEEYLSMIKDGHVDIIVGTHSLLGNRVEYNNLGLLVVDEEQRFGVKQKERIASFK
TSVDVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPIRTHLSAYSKDKVISAIKHEL
DRGGRVFYVLPRIKGLEDVMEFLELAFPHVEIAIAHGKQYSKQLEETMERFARGDIRILI
CTNIVESGLDIQNANTIIIQDVQQFGLAQLYQLRGRVGRADKEAHAHLFYPDKSLLSDHA
LERLAALEECCELGQGFQLAERDMAIRGFGNIFGEQQTGDVGNVGIDLFFEMLFESLSKV
DEHRVISVPYPAMELDININPHLPSEYINHLENPMQIINSAEKAAEKDIFNLMQFTENLR
RQYGKEPYSMEILLKKLYVRRMAADLGITSIYASGKMVGMKTNMSKKVFKLITDSATSDI
HQNSLIFEDGQIKAELLLELPKEQLLNWIFQCLAELYSSLPTLIKY
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgcaaaggcctccctcttcttctctccctcggagtgctttctcacaactcgt
ctctgcaaactcttctccactactcaaaaaccctcttttccctctccctcctcctcttct
attaccttaaccaatgtcctcaatgccgatgctgtacataccaaattgcctccccgacta
cggaatgcaagacaggagcaagagcgagacgccatttctctactcaacgagcgaattcgc
cgggagcatgctaagagagatcactcccctcttagaccggccatggattccgaggaggct
gataagtacattcagctcgtgaaagagcagcagcaaaggggccttcagaagctcaaaagc
gacagagccagacaaggtgctccacatgatgcagctcaacctacctttagttacaaggtg
gacccttacactctccgttccggcgattacgtggtccacaggaaagttggaattggtcga
ttcgttggcatcaaatttgacgttccaaaggattccaaagagcctattgaatacgtcttt
attgagtacgctgacggtatggctaaattacccgtcaagcaggcatctcgtttgctctac
cgttacaacctccctaatgaaaccaaaaggccacggactttgagcaagttaagcgatact
agtgcatgggagaggagaaggatgaagggaaaagttgcagttcagaaaatggttgtggat
ctaatggagctatacctacacaggttaaaacaaaaaaggcctccataccccaagactcca
gctatggctgaatttgcatctcagtttccttttgaacccacaccggatcagaaacaggca
ttctcagatgtagaaagggacttgacagagagtgaaaatccaatggacagattaatttgc
ggagatgttggttttggtaaaactgaggttgcactgcgtgccatcttctgtgtagtctct
gcagggaagcaagctatggttctagcgccaacaatagttttagctaagcaacattttgat
gttatctcagagagattttcaagatatcctaacataagagttggacttcttagcaggttt
cagaccaagtcagagaaagaggagtacttgagtatgattaaagacggccatgtggacatt
attgttgggactcattcactacttggcaatcgggttgaatataataatctgggtctactt
gtggttgatgaggaacagaggtttggtgtaaaacagaaggagaggattgcttcatttaaa
acttcagtggatgtactcacactttcagcaacgcctattccgagaactctatatttagca
ttaactggatttcgtgacgctagtttgatctcaacaccgcctcctgagagagttccaata
agaacacatctttcagcttacagtaaggacaaagtaatatcagctatcaagcatgaattg
gaccgtggtggtcgagttttttatgtcttgccccgcattaaaggtcttgaggatgttatg
gaattcttagaactggcatttccacatgttgaaatagctattgctcatggaaagcaatac
tcaaaacagcttgaggaaactatggaaagatttgcacggggagacattagaattcttata
tgtacaaatatagtagaaagtggccttgatattcaaaacgcaaacacaatcatcattcaa
gatgttcagcaatttggacttgcacaattgtatcagttgcgtggaagggtcggacgggcg
gataaggaagctcatgcacatttattctatcctgacaaatcacttctttcagaccatgca
ctagagagacttgctgctcttgaagagtgctgtgaacttggtcaaggttttcagcttgca
gaaagagacatggctattagaggatttggcaatatttttggtgagcaacagacgggggat
gtcggcaatgtgggcattgatctattctttgagatgttgtttgaaagcttgtctaaggtt
gatgagcatcgtgtaatatcagttccttaccctgcaatggagcttgatatcaatataaac
cctcatcttccttctgagtacataaaccatttggagaaccccatgcaaatcatcaatagc
gctgaaaaagcagctgaaaaggacattttcaacctgatgcaatttacggaaaatctgagg
cgtcagtatggcaaagaaccttactctatggaaatcctattgaaaaagctttatgtcaga
agaatggcagcagatttaggaattaccagcatttatgcttcaggaaagatggttggcatg
aaaacaaacatgtcaaaaaaggttttcaagttgataacggattcagcaacttcagatatt
catcaaaattctctgatatttgaagatggccaaataaaggctgaactgctcttggagcta
cctaaagaacagttgctgaattggatcttccaatgcctcgcagaattatattcttcattg
ccgaccttgataaaatattag
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