Solanum lycopersicum (tomato): 101257631
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Entry
101257631 CDS
T02665
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13-like isoform X3
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
101257631
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sly01002
]
101257631
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101257631
Enzymes [BR:
sly01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101257631
Peptidases and inhibitors [BR:
sly01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101257631
Ubiquitin system [BR:
sly04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101257631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
ubiquitin
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
101257631
NCBI-ProteinID:
XP_004251210
LinkDB
All DBs
Position
11:55394163..55415409
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AA seq
1115 aa
AA seq
DB search
MTIMTPAPTDQEEEEMLVPRSDLVFEGPQPMEAQAETGNDVEKQPPEDPQTSRFTWKIDN
FSRLNVKKLYSDPFVVGGYKWRILIFPKGNNVDYLSMYLDVADSANLPYGWSRYAQFNLS
IVNQIHNKYSIRKETQHQFNARESDWGFTSFMPLGELYDPNKGYLVDDTCVVDAEVAVRK
IVDYWSYDSKMETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSASIP
LALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFLQHDVQELNRVLCEKLEEKMKGTVVE
GTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCADVYASFDKYVEVERLEGDN
KYHAEQYGLQDAKKGVLFMDFPPVLQLQLKRFEYDFSRDTMVKINDRYEFPLQLDLDREN
GKYLSPEADGSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDVKR
ALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRECDKEKIMCNVDEKDIAEHLR
ARLKREQEEKEQKKKEKAEAHLYTIIKVSRDEDLRQQIGKDIHFDLVDYDKVRSFRIQKQ
TLFSIFKEEVAKEFGVPVQSQRFWLWAKRQNHTYRPNRPLTHLEEAQTVGQLREASSKVQ
NAELKLFLEVELGLDLRHIPPPDKTKDDIMLFFKIYDPEKEELRYAGRLFVKGTSNPTEI
LNKLNEMAGYAPDQEIELYEEIKFEPIVLCEPINKKFAFRTNQLEDGDIVCYQKSLSPES
RQKLRYPDVPSFLEYVQNRQVVHFRYLEKLKEDDFCLELSKINTYDEVVERVAQRLGLDD
PSKIRLTPHNCYSQQPKPQPIKYRGVDTLGDMLVHYNQTSDILYYEVLDIPLPELQGLKT
LKVAFHHATKDEVVTYTIRLPKQSTVGDVINDLKTKVELSNPDAELRLLEVFYHKIYKIF
PTSEKIENINDQYWTLRAEEIPEEEKNLGPNARLIHVYHFSKETAQNQMQIQNFGEPFLL
VIHEGETLVQVKVRIQKKLQVPDEEFAKWKFAFLSLGRPEYLEDSDILFNRFQRKDVYGA
WEQYLGLEHSDNAPKRINAAYQNRPTYEKPVKIYN
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgaccataatgactcctgctcctaccgatcaggaagaggaggagatgcttgttccgcgt
tcagatttggtatttgaaggacctcagcctatggaagcacaagcagaaaccggcaatgat
gtggaaaagcagccaccagaggatcctcaaacttcaaggtttacttggaagatagataac
ttctctaggttgaatgtaaagaaactatactctgacccttttgttgtcggtggctataaa
tggcggattttaatttttcccaaggggaacaatgttgattacctatccatgtatctggat
gttgctgattcagctaatttaccttacgggtggagtagatatgcccagttcaacttgtca
attgttaaccaaattcataacaagtactccatcagaaaagagacacaacaccaattcaat
gccagagaaagtgattggggtttcacatcctttatgccacttggtgaactatatgatcca
aacaaaggttatcttgttgatgatacatgtgttgttgatgctgaggtagctgtgcgaaaa
attgttgactattggtcgtatgactcaaaaatggaaactggctttgttggactgaagaac
caaggagctacctgttatatgaactcacttcttcaaactctctaccatattccttacttc
aggaaggctgtataccacatgcctacaactgaaaatgatatgccctctgctagtatccct
ctagcgttgcaaagcttattctataagctccagtacagtgacaacagtgtagcaacaaag
gagttgacaaaatcattcggatgggacacatatgattctttcttgcagcatgatgtgcaa
gaactcaatcgtgttctctgtgaaaagcttgaagaaaaaatgaagggtactgttgtggaa
ggcactatacagcagttattcgaagggcaccatatgaactatattgagtgcatcaatgtg
gactacaaatctacgagaaaggagtcattttatgatcttcagcttgatgtcaaagggtgt
gctgatgtttatgcttcgtttgataaatatgttgaagttgaacgtcttgagggcgataac
aagtaccatgccgaacaatatggtttgcaggatgctaagaagggtgtcttattcatggat
ttcccccctgtcctgcagcttcagttaaagcgctttgaatatgatttttcacgggacact
atggtaaagataaatgacaggtatgagttccctctgcaactcgatctagatagagagaat
ggtaaatacttgtcgcctgaggcagatggaagtgtcagaaacctttacacacttcacagt
gtattagtccacagtggtggtgtgcatggtgggcactattatgctttcataaggccaact
ctttcagatcaatggtataaatttgatgatgaacgtgtgactaaagaagatgtgaaaaga
gctctagaagagcagtatggaggagaagaagagttgccacaaacaaatcctggatttaat
aatactcccttcaaatttactaagtactcaaatgcttacatgctggtctatattcgggaa
tgtgacaaagagaaaataatgtgtaatgttgacgagaaggacattgctgagcaccttagg
gcaaggttaaagagagaacaagaagagaaagagcagaagaagaaggagaaagcagaggca
cacctttacacaattataaaggtttctcgtgatgaagacctcagacagcagattgggaag
gacatacattttgatttagtggattatgacaaagttaggagttttcgcattcagaagcag
acactttttagcatttttaaggaggaagttgccaaagaatttggtgtaccagtgcaatct
caacgtttttggttatgggcaaagcgccagaatcatacatatcgtccaaatcggccatta
acacatctcgaagaagctcaaactgttggacagttgagggaagcgtcaagtaaggttcag
aatgcagagctaaaattgttcttggaagtggagcttggactggacttgagacacatccct
ccacctgacaagactaaagatgatattatgctattcttcaagatttatgatcctgagaaa
gaagagctgaggtatgctggaagactctttgtaaagggaacgagtaatccaactgaaatc
ttgaacaaactaaatgaaatggctggctatgcccctgatcaagagattgaactatatgag
gaaataaaatttgaaccgattgtcttgtgtgaacccattaacaagaaatttgctttccga
acgaaccagcttgaggatggtgatatagtatgctatcagaaatccctttctcctgaaagt
cgccagaagttacggtatccagatgttccttctttcctggagtatgttcaaaatcgccag
gtggttcacttccgatacttagaaaagttgaaggaggatgatttctgtttagagctgtca
aagattaatacatatgatgaagttgtggaaagagtagctcagcgacttggcttggatgat
ccatccaaaataaggctcacaccccataattgttactctcagcaacctaaaccccagccg
atcaagtacagaggtgttgacacccttggagatatgctggtccactacaatcagacatct
gatattttgtactatgaagtactggacattcctttgccagaattgcaaggtttaaaaacc
ttaaaagtagcttttcatcatgctaccaaagatgaagtggtcacttacactatcagacta
ccaaaacaatctactgttggtgatgtaattaatgatttaaagacgaaggtagagttgtca
aatccagatgcagaattaagattgctagaggtcttctaccacaaaatttataagatattt
ccaacaagtgagaagatagagaacataaatgaccagtactggacattgagggccgaagag
attcctgaagaagagaagaatctaggcccgaatgctcgtttgattcatgtgtatcacttc
agtaaagaaactgcacaaaaccaaatgcaaattcagaattttggggaacctttcctcttg
gttatccatgagggtgagactttagttcaagtgaaggtgcgaatacagaagaaattgcag
gtcccagatgaagagtttgctaagtggaaatttgcattcctctcacttggtcgtcctgag
taccttgaggactcggatatattgttcaaccgtttccagcgaaaggatgtttatggtgct
tgggagcagtatcttggcttggaacattctgacaatgcccctaaaaggattaatgcagca
tatcagaatcgcccgacgtacgagaagcctgttaaaatttacaactag
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