Solanum lycopersicum (tomato): 101263417
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Entry
101263417 CDS
T02665
Name
(RefSeq) probable RNA-dependent RNA polymerase 3 isoform X1
KO
K11699
RNA-dependent RNA polymerase [EC:
2.7.7.48
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sly03036
]
101263417
Enzymes [BR:
sly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.48 RNA-directed RNA polymerase
101263417
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RDRC (RNA-directed RNA polymerase complex)
101263417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdRP
Motif
Other DBs
NCBI-GeneID:
101263417
NCBI-ProteinID:
XP_010322170
UniProt:
A0A3Q7GVL9
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All DBs
Position
6:complement(34444379..34472965)
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AA seq
1014 aa
AA seq
DB search
MGDPLIEEIDVLDAPLPYSVETMLDRICKEQGQKPPCTGIRRRLSSIGEKGSLEMLKIIS
RRPIKKSLSAFLVYMIDRYPDCLSSSSSPFNCLLKRSSSPRLFPSPEGKRLQGESSSKSK
LEMGLLACASPQKVARQLSFCEEPESNCRRTSPYVSQQLMILNELEFRKLFLVLSYIGCN
KLEDVISPQIADDIVRKKNLSMTDFESEIWNAFGKACYAVSDRSKYLDWNCRKTHIYYCH
IKQNGYCSFKGPYLNTLRTHLQRALGDDNVLIVKFVEDTSCANIILEEGILVGLRRYRFF
VYKDDKERKKSPAMMKTKTASLKCYFVRFESIGTCNDGESYVFSTKTISQARCKFMHVHM
VSNMAKYAARLSLILSKTIKLQTDLDSVTIERIEDILCRDENGCIIQDEDGEPRIHTDGT
GFISEDLAMHCPKDFSKAEYIKDENYENFVDIVDLDDVNVERRVSVSRNRKPPLLMQCRL
FFNGCAVKGTFLVNRKIGSRKIHIRPSMVKVEIDPTISSIPTFDSLEIVAISHRPNKAYL
SKNLISLLSYGGVHKEYFMELLGSALEETKQVYLRKRAALKVAINYREMDDECLTARMIS
SGIPLNEPHLHARLSRLAKIERTKLRGGKLPISDSFYLMGTADPTGVLESNEVCVILDNG
QVSGRVLVYRNPGLHFGDVHVMKARYVEELADVVGDAKYGIFFSTKGPRSAATEIANGDF
DGDMYWVSINRKLVDSYTTSRPWIRMHSTPNAVSKKPSEFSADELEYELFRQFLEAKSKG
ANMSLAADSWLAFMDRLLTLRDDNVDDMHSLKGKMLHLIDIYYDALDAPKSGKKVSIPHY
LKANKFPHYMEKGNSCSYHSTSILGQIYDHVDSYPDEDLCITEISKLPCFEVEIPQRCMT
LWRGRYEEYKKDMTRAMNFDCELRITSCNEVIKKYKMLLYGAVEFEQTVRKTEDIFDEAL
AIYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYRKEKDLPILPSVLQEIL
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatccgttgattgaagaaattgatgttctggatgcacctttaccatattctgta
gagacgatgcttgatagaatctgcaaggagcaggggcaaaaaccaccgtgtactggcatt
agaaggaggctgagctctattggtgaaaaagggtcattagaaatgctcaaaataatatca
cgtcgtcctatcaagaagagtctctctgcttttcttgtttacatgattgatcgctacccg
gattgtctctcctcttcctctagccccttcaattgtctactcaaacgctcttcttcccct
cgtctctttccatctccagagggtaaacgtttacaaggtgaaagttcttctaaatcaaag
cttgagatgggcttattggcctgtgcaagccctcagaaagttgctcgccagttatcattt
tgcgaggagcctgaatctaactgtagaagaacctccccttatgtcagccaacagttgatg
atcctcaatgaacttgaatttagaaaattgtttctggtactgagctacattggatgcaac
aagttggaagatgttatatcccctcaaattgctgatgatattgtaagaaagaaaaatctt
tccatgactgattttgaatcagaaatttggaatgcttttggaaaagcatgttatgctgtg
tcagatagatcaaagtacttagactggaattgcagaaagacacatatctactattgccac
attaagcagaacggatactgttccttcaagggtccatacttgaacacattaaggactcac
ttacagagagccctgggagatgacaatgtactgattgtaaaatttgttgaagatacaagt
tgtgccaatataattctcgaggaaggcattcttgttggcttgagacgttaccgtttcttt
gtgtataaagatgataaagagaggaagaaaagtccagctatgatgaagacaaaaactgct
tctttgaagtgctactttgttaggtttgagtccattggaacctgcaatgatggagaatcc
tatgtattttctaccaaaacaatcagtcaagcaaggtgtaaattcatgcatgtgcatatg
gtttctaatatggcaaaatatgcagccaggctttccttaattctatcaaagacgattaag
cttcaaacagatcttgattctgtcaccattgaaagaattgaagatatactttgtcgggat
gaaaatggttgtattattcaagatgaagacggcgaacctcgtatacatactgatggtact
ggtttcatatcagaagatttagctatgcattgtcccaaagatttttcaaaagcagaatat
ataaaagatgaaaattatgagaattttgttgatatcgtggaccttgatgacgtgaatgta
gaaagaagagtgagtgtatctcgcaataggaaaccgcctttgttgatgcagtgccgtttg
ttcttcaatggttgtgctgtgaaggggacttttcttgtcaatagaaagattggatcacga
aaaattcatattagaccctcaatggtgaaggttgagatagacccaacaatttcaagtata
ccaacttttgactcattggagatagttgcaatcagtcatagaccaaataaggcatatctg
tccaagaatttaatctctctgctgagctacggaggagtccataaagaatactttatggaa
cttttgggaagtgcgctggaagagacgaaacaagtatatttgaggaaacgtgcagctcta
aaagttgctatcaactatagagaaatggatgatgaatgtctaacagcaaggatgatatcg
tctgggatacctctcaatgaacctcatctccatgctcgcttgtctaggcttgcaaagatt
gaaagaactaagcttagaggaggaaagcttcctataagtgacagtttttatcttatggga
acagctgaccccactggtgtactggaaagcaatgaagtctgtgttattctagataatggc
caagtatctgggcgtgttttggtctatagaaatcctggtcttcactttggagatgtacat
gtgatgaaagcgcgatatgtggaagagcttgcagatgttgttggtgatgccaaatatggt
atatttttttcaactaaaggcccgaggtcagctgctactgagattgcaaatggtgacttt
gatggtgatatgtattgggtttccataaaccgtaagttggtagattcttatacaacaagt
agaccatggattcgcatgcattcaactcctaacgcagttagcaaaaaaccaagtgaattt
tcagctgatgaattggaatatgagctttttaggcaatttctggaagcaaagtctaaaggt
gccaatatgtctctggcagctgatagctggctggcatttatggatcgtcttctgacgctg
cgagatgataatgtggatgatatgcatagcttgaaaggcaagatgcttcacctgattgac
atctactatgatgcattagatgcacctaaaagcgggaagaaggttagcatccctcattat
ctgaaggcaaacaagttcccccactatatggaaaaagggaactcctgcagctatcattca
acttctattctgggtcagatttatgatcatgtcgactcatatccagatgaagatttgtgt
ataacagaaatctctaaactgccttgctttgaagttgaaatccctcaaagatgcatgaca
ttgtggagaggaagatatgaagagtacaaaaaggatatgacacgggccatgaactttgat
tgtgaactaagaatcacctcttgcaatgaagttataaagaagtacaagatgttgctatat
ggtgctgtggagtttgaacaaacagtaagaaagactgaagacattttcgacgaggccctt
gcaatatatcatgtaacatatgataatgcaaggatcacatacagcatagagaaatgtggt
tttgcttggaaagtagctggttctgcgctttgcaggatccacgccatgtatcgcaaggaa
aaagacttgcccattttgccatcggttttgcaggaaatactctag
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