KEGG   Solanum lycopersicum (tomato): 101264859
Entry
101264859         CDS       T02665                                 
Name
(RefSeq) nucleoporin-like protein
  KO
K14306  nuclear pore complex protein Nup62
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101264859
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sly03019]
    101264859
Messenger RNA biogenesis [BR:sly03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     101264859
SSDB
Motif
Pfam: Nsp1_C COG3_N
Other DBs
NCBI-GeneID: 101264859
NCBI-ProteinID: NP_001332778
UniProt: A0A3Q7EJY5
LinkDB
Position
1:84190726..84200976
AA seq 758 aa
MSTGFSFSSSTSPFSFSSNPSFTTTPSVAATTSASGSSPFSSPFANPNPTSSTPSFGFGT
STTSASSAPSFGFGSSTTSASSAPSFGFGSSTTSASSAPSFGFGSNTGASTPSFGFSSSA
ASGSSPQPTLFGSSSGSTTSASGSPLFGANSASAAANSSPFGSSLFGSSGTPSPGLFGSS
SAAASNSGLGLFDSSPFLSSTTASTGNAASSASTTPFSSSLFVSSSSASSSPFGSSSTAP
SFGFPSSAASLSFQSASNSASSSPGLSFASSAAASSFSSSSAFSFPGASPASSASSAPGF
SLLSTSTTTSISSAPGFSLAAASTSSAVSSPAFSFSTSSSAASGPAISLSTPTPSAASPA
PSFSFSMPAAASSSPSPFSASSSPSPFSVAKGTVSSVTASASSSSAPVSKPTSIGFSISS
SPLFSTVTTPTSISTTAAAIGASSTTSGTGLSLTFPAPTSSASTTSAVDSSPIAGFGTSA
PSTVFSLSSKASAPALSSQPQSTAAVPSFGVPSTTSATATSSAAQTSSPLTVASSSGTTS
TSTVVATSTPKLPSEITGKSVEEIIKEWNAELQERTAKFRKQANAIAEWDRRILQNRDIL
LKLESEVAKVVETQGSLERQLELIETHQEEVDKALQSMEEEAERIYKDERGVILDDEAAA
TRDAMYEQAEFVEREMEKMTEQIKSIINTFNACQGGELEATDGMTPLDVVVRILNNQLSS
LMWIDEKTEEFSSRIQKLASEGPAANRESTAPKLWLTR
NT seq 2277 nt   +upstreamnt  +downstreamnt
atgtcgacaggcttttcattctcctcttctacttcacccttctctttctcttcaaatccg
tcttttaccaccaccccctctgtcgccgctaccacatccgcttccggttcttccccattt
tcctcgcccttcgcaaaccctaaccccacctcctctactccttcttttggcttcggtaca
tctactacttcagcctcttctgctccttcttttggattcggttcatctactacttcagcc
tcttctgctccttcttttggattcggttcatctactacttcagcctcttctgctccttct
tttggtttcggctctaataccggtgcttctacaccgtcatttgggttttcatctagtgct
gcttctggttccagtccccaaccaactctatttggatcttcttccggatccactacatct
gcaagtggttcgccattgtttggggcgaattcagctagcgctgctgccaattcatcccct
tttgggtcttcacttttcgggtcgtcaggtacgccctcgccgggtttgtttgggtccagt
tcggctgctgcttcaaattcgggcttgggcttgtttgattcttctccgtttttatcatca
actactgcttctactggaaatgcagcatctagtgctagtacaactccattttcttcatct
ctatttgtgtcttcttcttcagcatcatcttcaccttttggatcatcttcaacagcccct
tcatttggttttccgtcatcagcggcctcactttcgttccagtcggcgtcaaattcagct
tcttcttcacctggactttcgtttgccagctcggcagctgccagttccttttcttcttca
tctgcattttctttccctggtgcttcacccgcaagttcagcttcttctgcaccgggattt
tctttgttaagtacttcaaccaccacttcaatatcttctgcaccgggattttcgcttgct
gctgcatcaactagttctgcagtctcctcaccagcattttcgttttcgacctcgagctca
gcagcatcaggtccagcaatttcattatcaacgccaacgccgagtgcagcatcacctgca
ccttcattctctttttccatgcctgctgcggcttcgtcatccccatcacctttttcagct
tcgtcatccccatcacctttttcggttgcaaaagggactgtaagctctgtaacagcttct
gcttcttcttcaagtgctccggtgtctaaacctaccagtattgggttttcaatttcttca
tcgcctttgttttcaactgttactacccccaccagcatttctacaaccgcagctgctatt
ggagcttcttctacgactagcgggactggtttatctctgacatttcctgcacccacttct
tcagcttcaacgactagtgctgttgattcatctccgattgctggatttggcacctctgcc
ccatctacagttttttcattgtctagcaaagcatctgcaccagctttatcctcacagcct
caatcaactgcggctgtgccaagctttggtgtcccgagcacaacttctgccactgcaaca
agttcagctgctcaaacatcatcacccttgactgtggcttctagtagtgggactacttca
acttctactgtagttgccacttccacaccgaaattaccatcagaaattacaggaaagtct
gtagaagagatcatcaaggaatggaacgctgagctgcaggaacgtactgcaaaatttaga
aagcaggctaatgcgattgctgagtgggacagaaggatcttgcagaaccgtgatattctt
ctcaaacttgagagtgaagttgcaaaggttgttgagacacaaggcagcttagagcgacag
ctggagctaattgagactcatcaggaagaggttgacaaggcattgcaaagcatggaagaa
gaagctgagcgaatttacaaagatgagagaggagtgattcttgatgatgaagctgcagca
acaagggatgcaatgtatgaacaggccgagtttgtggagagggaaatggagaaaatgaca
gagcagatcaagtcaatcattaatacttttaatgcctgccagggtggagaacttgaggca
actgatggaatgacaccgcttgatgttgttgtacgaatcttgaacaatcaattgagttca
ctgatgtggattgatgaaaagactgaagaattctcatctcgtattcagaagcttgcaagt
gaagggcctgctgccaatcgtgaatcaactgcccctaaattatggttgactcgatga

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