Solanum lycopersicum (tomato): 101264859
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Entry
101264859 CDS
T02665
Name
(RefSeq) nucleoporin-like protein
KO
K14306
nuclear pore complex protein Nup62
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101264859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101264859
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101264859
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
COG3_N
Motif
Other DBs
NCBI-GeneID:
101264859
NCBI-ProteinID:
NP_001332778
UniProt:
A0A3Q7EJY5
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Position
1:84190726..84200976
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AA seq
758 aa
AA seq
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MSTGFSFSSSTSPFSFSSNPSFTTTPSVAATTSASGSSPFSSPFANPNPTSSTPSFGFGT
STTSASSAPSFGFGSSTTSASSAPSFGFGSSTTSASSAPSFGFGSNTGASTPSFGFSSSA
ASGSSPQPTLFGSSSGSTTSASGSPLFGANSASAAANSSPFGSSLFGSSGTPSPGLFGSS
SAAASNSGLGLFDSSPFLSSTTASTGNAASSASTTPFSSSLFVSSSSASSSPFGSSSTAP
SFGFPSSAASLSFQSASNSASSSPGLSFASSAAASSFSSSSAFSFPGASPASSASSAPGF
SLLSTSTTTSISSAPGFSLAAASTSSAVSSPAFSFSTSSSAASGPAISLSTPTPSAASPA
PSFSFSMPAAASSSPSPFSASSSPSPFSVAKGTVSSVTASASSSSAPVSKPTSIGFSISS
SPLFSTVTTPTSISTTAAAIGASSTTSGTGLSLTFPAPTSSASTTSAVDSSPIAGFGTSA
PSTVFSLSSKASAPALSSQPQSTAAVPSFGVPSTTSATATSSAAQTSSPLTVASSSGTTS
TSTVVATSTPKLPSEITGKSVEEIIKEWNAELQERTAKFRKQANAIAEWDRRILQNRDIL
LKLESEVAKVVETQGSLERQLELIETHQEEVDKALQSMEEEAERIYKDERGVILDDEAAA
TRDAMYEQAEFVEREMEKMTEQIKSIINTFNACQGGELEATDGMTPLDVVVRILNNQLSS
LMWIDEKTEEFSSRIQKLASEGPAANRESTAPKLWLTR
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaggcttttcattctcctcttctacttcacccttctctttctcttcaaatccg
tcttttaccaccaccccctctgtcgccgctaccacatccgcttccggttcttccccattt
tcctcgcccttcgcaaaccctaaccccacctcctctactccttcttttggcttcggtaca
tctactacttcagcctcttctgctccttcttttggattcggttcatctactacttcagcc
tcttctgctccttcttttggattcggttcatctactacttcagcctcttctgctccttct
tttggtttcggctctaataccggtgcttctacaccgtcatttgggttttcatctagtgct
gcttctggttccagtccccaaccaactctatttggatcttcttccggatccactacatct
gcaagtggttcgccattgtttggggcgaattcagctagcgctgctgccaattcatcccct
tttgggtcttcacttttcgggtcgtcaggtacgccctcgccgggtttgtttgggtccagt
tcggctgctgcttcaaattcgggcttgggcttgtttgattcttctccgtttttatcatca
actactgcttctactggaaatgcagcatctagtgctagtacaactccattttcttcatct
ctatttgtgtcttcttcttcagcatcatcttcaccttttggatcatcttcaacagcccct
tcatttggttttccgtcatcagcggcctcactttcgttccagtcggcgtcaaattcagct
tcttcttcacctggactttcgtttgccagctcggcagctgccagttccttttcttcttca
tctgcattttctttccctggtgcttcacccgcaagttcagcttcttctgcaccgggattt
tctttgttaagtacttcaaccaccacttcaatatcttctgcaccgggattttcgcttgct
gctgcatcaactagttctgcagtctcctcaccagcattttcgttttcgacctcgagctca
gcagcatcaggtccagcaatttcattatcaacgccaacgccgagtgcagcatcacctgca
ccttcattctctttttccatgcctgctgcggcttcgtcatccccatcacctttttcagct
tcgtcatccccatcacctttttcggttgcaaaagggactgtaagctctgtaacagcttct
gcttcttcttcaagtgctccggtgtctaaacctaccagtattgggttttcaatttcttca
tcgcctttgttttcaactgttactacccccaccagcatttctacaaccgcagctgctatt
ggagcttcttctacgactagcgggactggtttatctctgacatttcctgcacccacttct
tcagcttcaacgactagtgctgttgattcatctccgattgctggatttggcacctctgcc
ccatctacagttttttcattgtctagcaaagcatctgcaccagctttatcctcacagcct
caatcaactgcggctgtgccaagctttggtgtcccgagcacaacttctgccactgcaaca
agttcagctgctcaaacatcatcacccttgactgtggcttctagtagtgggactacttca
acttctactgtagttgccacttccacaccgaaattaccatcagaaattacaggaaagtct
gtagaagagatcatcaaggaatggaacgctgagctgcaggaacgtactgcaaaatttaga
aagcaggctaatgcgattgctgagtgggacagaaggatcttgcagaaccgtgatattctt
ctcaaacttgagagtgaagttgcaaaggttgttgagacacaaggcagcttagagcgacag
ctggagctaattgagactcatcaggaagaggttgacaaggcattgcaaagcatggaagaa
gaagctgagcgaatttacaaagatgagagaggagtgattcttgatgatgaagctgcagca
acaagggatgcaatgtatgaacaggccgagtttgtggagagggaaatggagaaaatgaca
gagcagatcaagtcaatcattaatacttttaatgcctgccagggtggagaacttgaggca
actgatggaatgacaccgcttgatgttgttgtacgaatcttgaacaatcaattgagttca
ctgatgtggattgatgaaaagactgaagaattctcatctcgtattcagaagcttgcaagt
gaagggcctgctgccaatcgtgaatcaactgcccctaaattatggttgactcgatga
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