Solanum lycopersicum (tomato): 543704
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Entry
543704 CDS
T02665
Symbol
HDS
Name
(RefSeq) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
KO
K03526
(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:
1.17.7.1
1.17.7.3
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00900
Terpenoid backbone biosynthesis
sly01100
Metabolic pathways
sly01110
Biosynthesis of secondary metabolites
Module
sly_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
543704 (HDS)
Enzymes [BR:
sly01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.1 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
543704 (HDS)
1.17.7.3 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
543704 (HDS)
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GFIT
Motif
Pfam:
GcpE
Sgf11
zf-RING_7
Motif
Other DBs
NCBI-GeneID:
543704
NCBI-ProteinID:
NP_001234648
UniProt:
Q8GZR6
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Position
11:54273257..54280650
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AA seq
740 aa
AA seq
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MAAGTVPASFTGLKSNENGLGFAKSMNFIRVSDLQRVKFRRTKFSVIRNANPGQETIELQ
PASEGSPLLVPRQKYCESIYKTVRRQTCTVMVGNVALGSEHPIRIQTMTTTDTKDVAATV
EQVMKIADAGADIVRITVQGRKEADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAEC
FDKIRVNPGNFADRRAQFEQLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAMRIGTNHG
SLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVVMVQAYRLLVAEMY
VQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEAPEEEIDPCRRLA
DLGKRAAALQQGVAPFEEKHRRYFDFQRRSGELPAQKEGDEVDYRGVLHRDGSVLMSVSL
NQLKTPELLYRSLAAKLIVGMPFKDLATVDSILLRELPPLDDIDSRLALKRLVDISMGVI
APLSEQLTKPLPNAMVLVTLKELSGGAHKLLPEGTRLVVSLRGDESHDELEILKSSDVTM
ILHNLPYTEEKIGRVQAARRLFEYLSENSLNFPVIHHIQFPSNTHRDDLVIGAGTNAGAL
LVDGLGDGLLLEAPDKDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAQ
IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRAIEMEHAT
DALIQLIKDHDRWVDPPTEE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaggaactgttccagcttcatttacaggcttgaagagcaatgaaaatggtttg
gggttcgcaaaaagtatgaactttataagagtttccgacttacagagggttaagttccgg
cgaacaaaattttctgtgataagaaatgcaaatcctggtcaagaaaccattgaacttcag
cctgcatccgaagggagtccactactagttcctaggcaaaaatattgtgaatccatatac
aaaactgtcagaagacagacctgcactgtgatggttgggaacgtggctcttggtagcgaa
catccaattagaattcaaacaatgaccacaactgataccaaagatgtcgctgcaacagta
gaacaggtgatgaaaattgctgatgcgggagctgacatagttcggattacagtccaaggg
aggaaagaagctgatgcatgttttgaaattaaaaatactctggtgcaaaagaattacaac
atccctctggtggctgacattcattttgctccttctgttgcacttcgagtggctgagtgc
tttgacaaaatacgtgtcaatcctggaaactttgctgacaggcgagcccagtttgagcaa
ttagagtacacagaagatgactatcagaaagaactcgagcatattgaggaggtctttaca
ccattggtggaaaaatgtaagaagtatggacgtgcaatgcgcattgggacaaaccatggg
agcctttcagatcgcattatgagctattatggggactcacctaggggaatggtagaatca
gcatttgagtttgccagaatttgtagaaagttggacttccacaattttgtcttctcaatg
aaagctagcaatccagtagttatggttcaggcgtatcgccttcttgtagctgagatgtat
gttcaaggatgggattatcctttacacttgggagttactgaagctggtgaaggtgaggat
ggaaggatgaagtctgcaatcggaattggcacacttcttcaggatggtttgggtgatacg
atacgggtttccctaactgaagctccagaagaggagatagatccctgtcgacgattggca
gaccttggtaaaagagcagctgcgcttcagcaaggagtggccccctttgaagaaaagcac
agacgttattttgactttcaacgtaggtcaggggaattgccagctcaaaaggagggtgat
gaagtagactacagaggcgtgttgcatcgagatggttctgttcttatgtctgtctctttg
aatcaattaaagacccctgaacttttgtacagatcattagcggcaaagcttattgttggc
atgccatttaaggatttggcaactgtggactcaatcctgttgagggaacttccaccacta
gatgatatagattctcgtctagctctcaagagattggtcgacataagcatgggagtcatt
gctcctctctcagagcaattgacaaagccattacccaatgccatggtcttggttactctg
aaggagttgtctggtggtgctcacaagcttcttcccgaaggtacgagattggttgtgtct
ctgcgtggcgatgaatcacatgatgagttggaaatcctgaagagctctgatgttacaatg
attcttcataatctgccatatacagaggaaaaaattggcagggttcaagcagccaggagg
ctttttgagtatctttccgagaattccttgaactttccagtgattcatcacatacaattt
cccagcaacacccacagagatgacttagtgattggtgccgggacaaatgcgggagccctc
ttggtagatgggcttggtgatggacttctcttggaagctccagacaaggattttgatttt
ctcagaaatacatctttcaatttgcttcaaggttgcagaatgcggaacacaaaaacggaa
tatgtatcatgcccatcctgtggcagaactttattcgatcttcaagagataagcgctcaa
attagagagaagacgtcacacttgcctggtgtttcaattgccatcatgggttgcattgtg
aatggacctggggagatggctgatgctgactttggatatgttggtggtgctcctggaaag
attgacctttacgtcggcaagacagtggtgaaacgcgctattgaaatggagcatgcaacg
gatgcactgatccagctaatcaaagatcatgaccgctgggttgatcctcctaccgaggag
taa
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