Sulfurovum mangrovi: LN246_11720
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Entry
LN246_11720 CDS
T09512
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
smab
Sulfurovum mangrovi
Pathway
smab00190
Oxidative phosphorylation
smab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smab00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
LN246_11720
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LN246_11720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smab03019
]
LN246_11720
Enzymes [BR:
smab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
LN246_11720
Messenger RNA biogenesis [BR:
smab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LN246_11720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
ABM
Motif
Other DBs
NCBI-ProteinID:
UFH60538
LinkDB
All DBs
Position
2290703..2292784
Genome browser
AA seq
693 aa
AA seq
DB search
MDLNSSQLYFNRELSWLQFNSRVLAQALDENLPPLERLKFIAIYGTNLDEFYMIRVAGLK
SLYSARIQETGPDKLTPGEQLEEIRNYLHKEHETLESCYNSIVSELYTYGVNIKNYNTLN
TKEQAQVKEIFLNEIYPVIIPIAVDATHPFPHLNNLSFGLALTLKDDSNQIKHGLIRIPR
ILPRFIQLEHTFVPIDTVVEYFASELFPGFKCIASTPFRVTRNADIEIEEEEADDFLEIL
QEGLRSRNKGSFIRLELLDEANNDLVQFLLSYLNLDQEDIYAFKSIPLDLGSLWQIVGEN
SLSHLVLPTFSPKVLPPLDSEDIFEAIDKQDILLYHPFDSFDPVVKFISQAAADPDTLAI
RMTLYRAGPKSPIVKALIDAVRDGKQVMVLVELKARFDEENNLRWAKLLEEVGAHVVYGI
PGLKVHAKIAQVIKRKGKKLQSYVHLATGNYNPSTAKIYTDVSYFSSKEEYVKDATNFFH
FLTGFSTYTKLDTLYMAPTQIKPKLLRLIEKESRHGNEGHMILKANSLVDQDIIKALYKA
SQEGCKIDLIIRGICCLKPGIKGVSENITVHSIIGKYLEHPRIYYFKHAKTTCYISSADL
MPRNLVRRVELMTPITEEHHTQKVIQILKLQLADNNLNWKLQPDGNYVKVPELGKSVNNH
KILEDYTNKIHNKSKKETPDYVNRLANRLLKES
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggatctaaattcatcacaactctattttaaccgtgaactctcatggctgcagttcaac
tcccgggtactcgctcaggcactcgacgagaatcttccaccgcttgagaggctgaagttt
attgcgatctacggaaccaatcttgatgaattctacatgatacgtgttgcagggcttaaa
tccctctactctgcacgcatccaggagaccggacctgacaagctgacacccggtgaacag
cttgaggagatacgtaactaccttcataaagagcatgagacattagagtcatgctacaac
tcgatcgtctctgaactctatacctatggcgtcaatatcaaaaactacaataccctcaac
actaaagagcaggcacaggtcaaagagatctttctcaatgagatctatccggtcatcatc
ccgatcgccgtagatgcaacccaccctttccctcacttgaacaacctcagtttcggtctg
gcactcacgctgaaagatgactccaatcagatcaagcacggtctgatccgtatcccgcgt
atcctgcctcgatttatccagcttgagcatactttcgtaccgatcgatacggtggtggag
tattttgcgtccgaactctttcctggattcaaatgtatcgcctctactccgttcagggtt
accagaaatgccgatatcgagatcgaagaggaggaagccgatgattttcttgagatcctc
caggagggattacgctcaagaaacaaaggctcattcatccgactggaactgcttgatgaa
gcaaataatgacctggtgcagttccttctctcttacctgaacctcgatcaggaagatatc
tacgccttcaaatccattcctcttgaccttggaagcctctggcagatcgtgggagagaac
tccctttcacaccttgtgcttcctactttcagtccgaaagtactgccgccgcttgacagc
gaagatatctttgaagccatagacaaacaggatatcctgctctaccacccgtttgacagc
ttcgatcccgtcgtcaagttcatctcccaggctgctgcagatcctgatacactggcgatc
cgtatgacactctaccgtgccggtccaaagtcaccgatcgtcaaagcgctcatcgatgca
gtacgtgacgggaaacaggtgatggtactggtcgagctgaaagcacgttttgatgaagag
aacaaccttcgctgggccaagctgcttgaagaggtaggcgcacatgtcgtctatggaatc
cctggccttaaagtgcatgcaaagatcgcacaggtgatcaaacgcaaaggaaagaaactg
caaagttatgtacaccttgcgacaggaaactataatccgagtacggcaaagatctacacg
gatgtgtcctacttcagctccaaggaagagtatgtaaaagatgcgacaaactttttccac
ttccttacaggtttctctacctataccaagctggacacactctatatggcgccgacacag
atcaaaccgaaactgctccgcctcatcgaaaaggagagccgtcacggcaatgaagggcat
atgatcctcaaagccaactccctggtagaccaggatatcatcaaagcactctataaagcc
tcccaggaagggtgtaagatcgatctgatcatcagaggaatctgctgtctgaaaccgggg
atcaaaggggtgagtgaaaatatcacggttcactccattatcggtaagtacctcgaacat
ccccgtatctactacttcaagcatgcaaagacaacatgctacatctccagtgccgacctg
atgccgcgtaacctggtaagacgtgtagagttgatgacaccgatcacggaagaacaccat
acacaaaaggtcattcagatacttaaactgcagcttgcggacaacaacctcaactggaaa
cttcagccggatggcaactatgtgaaagtaccggaactgggaaaatcagtcaataaccac
aagatactggaagactacaccaacaaaatacacaacaaatcaaaaaaagagacgccggac
tatgtcaaccgtttggcaaacagactgctaaaggagagctga
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