Serratia marcescens subsp. marcescens Db11: SMDB11_2462
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Entry
SMDB11_2462 CDS
T03985
Symbol
lacZ
Name
(GenBank) beta-D-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00052
Galactose metabolism
smac00511
Other glycan degradation
smac00600
Sphingolipid metabolism
smac01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
SMDB11_2462 (lacZ)
09103 Lipid metabolism
00600 Sphingolipid metabolism
SMDB11_2462 (lacZ)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
SMDB11_2462 (lacZ)
Enzymes [BR:
smac01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
SMDB11_2462 (lacZ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2_N
Bgal_small_N
LacZ_4
Glyco_hydro_2
MdcG
Motif
Other DBs
NCBI-ProteinID:
CDG13028
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All DBs
Position
2604374..2607463
Genome browser
AA seq
1029 aa
AA seq
DB search
MPAAPLASLTEILARRDWQNPACTHYRRLDAHPPFASWRTVEDARDDAPSASRRSLNGEW
RFSYFPRPEAAPEGWLQQDLPDAAPLAVPGNWQLAGYDAPIYTNVRYPFPVDPPRVPADN
PTGCYSRNFSVDPAWLAAGQTRVIFDGVNSAFYLWCNGNWVGYSQDSRLPAEFDLSPWLR
PGENRLAVMVLRWCDGSYLEDQDMWRMSGIFRDVSLLHKPAAHLSDVRITTPLHDSFTRG
ELVVTARANRPGPLQVQVQLWRDGARVAERTQPLGSEIVDERGAYDDRVTLRLPVERPAL
WSAETPALYRATVALLSPEGEIIEVEAYDVGFRQVEISGGLLKLNGQPLLIRGVNRHEHH
PRHGQVMDEATMRHDILLMKQHNFNAVRCSHYPNHPLWYRLCDRYGLYVVDEANIETHGM
QPMNRLADDPLWLPAMSERVTRMVQRDRNHPCIIIWSLGNESGHGVNHDALYRWVKSQDP
TRPVQYEGGGADTAATDIICPMYARVDQDQPFPAVPKWAIGKWIGLPEEQRPLILCEYAH
AMGNSFGGFERYWRAFHAHPRLQGGFVWDWVDQALIKRDERGEEFWAYGGDFGDSPNDRQ
FCLNGLVFADRTPHPALFEAQRAQQLFRFAFDAASLTLTVTSDYLFRHTDNEQLNWRLEL
DGVERASGSFDLALPPQGSTRFTLLDRLPMLHQPGELWLNVEVVQPQATDWSEAHHRCAW
DQWRVPRALHPAPPPAQGLPPTLTEDEQGLTLTHGDQRWRFERSSGHLTQWWQNEQPQLL
TPLRDGFARAPIDNDIGVSEADHIDPNAWVERWKLAGLYRLEERCTRLQADAMQNGVQVV
SEHQFGVDGEILLISRKQWLFDALGAVSVNVEVEVADALPPPARIGLHCQLATVQPQAEW
LGLGPHENYPDRCLAAQHGRWRLPLADLHTPYIFPGENGLRCDTRSLRYGGWRIDGRFHF
SLSRYGLQQLMACSHQHLLQPEAGTWLHLDGFHMGVGGDDSWSPSVHRDYLLTAGVYRYQ
LRLQRAPEG
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctgcgccccttgcttccctgaccgagatcctcgcccgccgtgactggcaaaac
ccggcctgcacccactaccgccgactggacgctcacccgccgttcgccagctggcgcacg
gtggaagacgcgcgcgacgatgcccccagcgccagccgccggtcgctgaacggcgagtgg
cgcttcagctatttcccgcgcccagaggcggcgccggaaggctggctgcagcaggatctg
ccggacgccgccccgctggcggtgccgggcaactggcagctcgccggctacgatgcgccg
atttacaccaacgtgcgctacccgttcccggtcgatccgccgcgcgtgccggcagacaac
cccaccggctgctactcgcgcaacttcagcgtcgatccggcctggctggccgccggccag
acgcgcgtcatcttcgacggcgttaactcggcattctatttgtggtgcaacggcaactgg
gtcggctattcgcaggacagccgcctgccggcggagttcgatctcagcccgtggctgcgg
ccgggtgaaaaccggctggcggtgatggtgctgcgctggtgcgacggcagctatctggaa
gatcaggacatgtggcgcatgagcggcatcttccgcgacgtcagcctgctgcacaaaccc
gccgcgcacctgagcgatgtgcgcattaccacgccgctgcatgacagctttacccgcggc
gaactggtggtgacggcgcgcgccaaccggcccggcccgctgcaggtgcaggttcagctg
tggcgcgatggcgcgcgggtggccgaacgcacccagccgctcggcagcgagatcgtggac
gagcgcggcgcctatgacgatcgcgtcacgctgcgcctgccggtggaacgcccggcgctg
tggagcgccgaaacgcccgcgctgtatcgcgccaccgtcgccctgctctcgcccgagggg
gagattatcgaggtggaggcctatgacgtcggcttccgtcaggtagaaatcagcggcggg
ttgctgaagctcaacggacagccgctgctgatccgcggcgttaaccgccacgagcatcat
ccgcgccacggccaggtgatggacgaggcgacgatgcgccacgacatcctgctgatgaag
cagcacaacttcaacgcggtgcgctgctcgcattaccccaatcacccgctgtggtaccgg
ctgtgcgaccgttacgggctgtacgtggtggacgaagccaatatcgagacccacggcatg
cagccgatgaaccgcctggctgacgatccgctgtggctgccggcgatgagcgagcgcgtt
acccgcatggtgcagcgcgatcgcaaccacccctgcatcattatctggtcgctgggcaac
gagtccggccacggcgtgaaccacgatgcgctgtaccgctgggtgaaaagccaggatccg
acccgcccggtgcaatatgaaggcggcggcgccgacaccgccgctaccgacatcatctgc
ccgatgtatgcgcgagtggatcaggatcagccgttcccggcggtgcccaaatgggcgatc
ggcaagtggatcggcctgccggaggaacagcgcccgctgatcctgtgtgaatacgcccat
gcaatgggcaacagcttcggcggtttcgagcgctactggcgcgcgttccatgcacatccg
cgcctgcagggcggctttgtctgggactgggtcgatcaggcgctgatcaaacgcgacgag
cgcggcgaagagttctgggcctacggcggcgacttcggcgactcccccaacgatcgccag
ttctgcctgaacgggctggtgttcgcggatcgtaccccacacccggcactgttcgaagcg
cagcgggcccagcagctgttccgcttcgccttcgacgccgcctcgctgacgctgaccgtc
accagcgattacctgttccgccacaccgacaacgaacagctcaactggcggctggagctg
gacggcgtggagcgcgccagcggcagcttcgatctggcgctgccgccgcagggcagcact
cgcttcaccctgctcgaccggctgccgatgctgcatcagcccggcgagctgtggctgaac
gtggaggtggtgcagccgcaggccaccgactggtccgaagcgcaccaccgctgcgcctgg
gatcagtggcgggtgccgcgcgcgctgcatcccgccccgccgccggcgcagggcctgccg
cccacgctgactgaagacgagcaggggctgacgctcacccacggcgaccagcgctggcgc
ttcgagcgcagcagcggccacctgacgcagtggtggcagaatgaacagccgcagctgctg
acgccgctgcgcgacggctttgcgcgcgcgccgatcgataacgacatcggcgtcagcgaa
gcggaccatatcgatcccaacgcctgggtcgaacgctggaagctggcgggcctgtaccgg
ctggaggagcgctgcacgcggctgcaggcggatgcgatgcaaaacggcgtgcaggtggtg
agcgaacaccagttcggcgtggacggggagattttgctgatcagccgcaaacagtggctg
ttcgacgcgttgggcgcggtgagcgtgaacgtggaggtcgaggtggccgacgccctgccg
ccgccggcgcgcatcggcctgcactgccaactggcgacggtgcagccgcaggcggaatgg
ctgggcctgggcccgcacgagaactacccggatcgctgcctggccgcgcaacacgggcgc
tggcgcctgccgctggcggatctgcacacgccgtatattttccccggcgagaacggcctg
cgctgcgacacccgcagcctgcgctacggcggctggcgcatcgacggccgcttccacttc
tcgctcagccgctacggcctacaacagctgatggcctgcagccaccagcatctgctgcag
ccggaagcaggcacctggctgcatctggacggcttccacatgggggtgggcggcgacgac
tcctggagcccgagcgtgcaccgggattacctgctcaccgccggcgtttaccgctatcag
ctgcgcctgcagcgggcgcccgagggctaa
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