Serratia marcescens subsp. marcescens Db11: SMDB11_2582
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Entry
SMDB11_2582 CDS
T03985
Name
(GenBank) putative helicase
KO
K19789
DNA repair protein RadD
Organism
smac
Serratia marcescens subsp. marcescens Db11
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smac03400
]
SMDB11_2582
DNA repair and recombination proteins [BR:
smac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
SMDB11_2582
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
zf-tcix
zf-ribbon_3
AAA_16
AAA_30
zinc_ribbon_2
SLFN-g3_helicase
AAA_22
AAA
UPF0547
Motif
Other DBs
NCBI-ProteinID:
CDG13148
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Position
2742660..2744417
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AA seq
585 aa
AA seq
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MAFTLRPYQLEAVEATINHFRRHPEPALIVLPTGAGKSLVIAELAKRARGRVLVLAHVKE
LVAQNHAKYCAYGLEADIFAAGLQQKESAGKVVFGSVQSVARNLPLFDGAFSLLIVDECH
RISDDDDSQYQQIIQHLQKTNPQLRLLGLTATPYRLGKGWIYQYHYHGFTRGDSASLFRD
CIYELPLRYMIKNGFLVPPERLDMPIVQYDFSRLEARSNGLFSEAELNRELKRQNRVTPH
IISQIVEYAEDRKGVMIFAATVEHAREIHGLLPNGEAALVSAETPPAERDALIDAFKQQR
LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPNKKDCLILDYAGNP
HDLFTPEVGVSKPHGDSQPVQVFCPACGFANLFWGKCTENGDIIEHYGRRCQGWLEDDDG
HREQCDYRFRFKSCPHCGAENDIAARRCHQCQEVLVDPDDMLKAALKLKDALVLRCGGME
LQSGRDDKGEWLKATYYDEDGTSTSERFRLQTPAQRKAFEMLFLRPHQRAPGVPFAWHTA
ADVLAQQQALRHPDFVVARKRGQFWQVREKVFDYQGRFRRANQLA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcctttaccctacgcccctaccaactggaagcggtcgaagccaccatcaaccatttc
cggcggcaccccgaaccggcgctgatcgtgctgccgaccggtgccggcaaaagcctggtg
atcgccgagctggcgaagcgcgcccgcgggcgggtgctggtgctggcgcacgtcaaggaa
ctggtggcgcaaaatcacgccaaatactgcgcctacggcctggaagcggatatcttcgcc
gccggcctgcagcagaaagagagcgccggcaaggtggtgttcggcagcgtacagtccgtc
gcgcgcaacctgccgctgttcgacggcgccttttcgctgctgatcgtcgatgaatgccac
cgcatcagcgacgacgacgacagccagtaccagcaaatcatccagcatttacagaaaacc
aacccgcagctgcggctgctggggctgaccgccacgccttaccgactgggcaagggctgg
atttaccagtatcactaccatggcttcacccgcggcgacagcgccagtctgtttcgcgac
tgcatctacgagctgccgctgcgctacatgattaagaacggcttcctggtgccgcctgag
cggctggatatgccgatcgtgcaatatgacttcagccggctggaggccaggagcaacggc
ctgttcagcgaagcggagctgaaccgcgagctgaagcggcaaaaccgcgtcacgccgcac
atcatcagccagatcgtggagtacgcagaggatcgcaaaggcgtgatgatcttcgccgcc
accgtcgaacacgcccgcgagatccacggcctgttgccgaacggcgaagccgcgctggtc
agcgccgaaacgccgcccgccgagcgcgatgcgctgatcgacgcgttcaaacagcagcgg
ctgcgctatctggtcaacgtcgcggtattgaccaccggtttcgacgcgccgcacgtcgat
ctgatcgcgatcctgcgccccaccgagtccgtcagcctgtaccagcagatcgtcgggcgc
gggctgcgtttggcgcccaacaaaaaggattgcctgatcctcgactacgccggcaacccg
cacgatctattcacgccggaggtcggcgtcagcaagccgcacggcgacagccagccggtg
caggtattctgcccggcctgcggcttcgccaacctgttctggggcaagtgcaccgagaac
ggcgatatcatcgagcactacggccgccgctgccagggctggctggaagacgacgacggc
caccgcgagcagtgcgattaccgcttccggttcaagagttgcccgcactgcggcgcggag
aacgatatcgccgcacgccgctgccatcaatgtcaggaagtgttggtcgatcccgacgac
atgctgaaggcggcgctgaagctgaaagacgcgctggtgctgcgctgcggcggcatggaa
ctgcagagcggccgcgacgacaagggcgaatggctgaaggccacctattacgacgaggac
ggcaccagcaccagcgagcgcttccgcctgcagacgccggcgcagcgcaaagcgttcgag
atgctgttcctgcgcccgcatcagcgcgcgccgggcgtgccgttcgcctggcacaccgcc
gccgacgtgctggcgcaacagcaggcgctgcgccatcccgatttcgtggtggcgcgcaag
cgcgggcagttttggcaggtgcgtgagaaagtgttcgattatcaaggccgtttccgccgc
gccaatcagttggcctga
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