Serratia marcescens subsp. marcescens Db11: SMDB11_3393
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Entry
SMDB11_3393 CDS
T03985
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00550
Peptidoglycan biosynthesis
smac01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SMDB11_3393 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
smac01003
]
SMDB11_3393 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smac01011
]
SMDB11_3393 (mrcB)
Enzymes [BR:
smac01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
SMDB11_3393 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SMDB11_3393 (mrcB)
Glycosyltransferases [BR:
smac01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
SMDB11_3393 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
smac01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
SMDB11_3393 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
PBP1_TM
Transpeptidase
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
CDG13958
LinkDB
All DBs
Position
complement(3602946..3605438)
Genome browser
AA seq
830 aa
AA seq
DB search
MAGDDREPIGRKGKQPKSTASRKPPRRRRDDDYDDYEEDEYDDDEYEEEEERMPRKVKAT
PPRKKRRWLGLFIKLILVIAVLLAIYGVYLDSQIRSRIDGKVWQLPAAVYGRMVNLEPGM
PYSKKEMVNLLEGMQYRQVSRMTRPGEFTVQANSIEMLRRPFDFPDGKEGQIRARLDFQN
NRLAKIENLDSGRSFGFFRLDPRLITMLQSPNGEQRLFVPRSGFPDLLVDTLIATEDRHF
YEHDGISPYSIGRAVLANLTAGRAVQGGSTLTQQLVKNLFLTNERSLWRKANEAYMALLV
DYRYSKDRILELYLNEVYLGQSGSDQIRGFPLASLYYFGRPVDELSLDQQALLVGMVKGA
SLYNPWRNPKLALERRNLVLKLLQNQGVIDGELYDMLSARPLGVQPKGGVITPQPAFMQM
VRQELQTKLGDKVNDLSGVKIFTTLDPVSQDAAEKAVEDGIPALRAARHLQDLEAAMVIV
DRFSGEVRAMVGGANPQFAGFNRAMQARRLVGSLAKPPTYLTALSEPDKYRLNTWLADAP
LSLKQPNGAVWQPNNYDRKFRGQVMLVDALANSLNVPTVNLGLSVGLDQISATLQRLGIP
KAEINPVPSMLLGAIGLTPMEVAQEYQTIASGGNRAPLSAVRSVIAEDGTVLYQSFPQAE
RMVPAQAAYLTLYAMQQGVARGTSRSLSVKFPNYNLAAKTGTTNDLRDSWFAGIDGKEVA
IAWVGRDNNGPAKLTGANGALTLYRRYLENQTPLPLMLQPPEGINQMSIDSAGNFICGGG
SWRTIPVWTDNPQGLCQASQAAVQQQQQPAAGEQKDGDGVAGWIKDMFGQ
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggctggggatgaccgcgagcccatcgggcgcaaaggaaaacaaccaaaaagcaccgcg
tcgcgcaagccgccgcgccgtcgccgagacgacgattatgacgattacgaagaagacgag
tatgacgatgatgagtatgaagaggaggaggaacgcatgccgcgtaaggtaaaagcgact
ccgccgcgtaaaaaacgccgttggctcggcctgtttatcaaactgatcctggtgatcgcc
gtcttgttggcaatctatggcgtctacctggactcgcagatccgcagccgcatcgacggt
aaagtctggcagctgccggcggcggtgtacggccgcatggtcaacctggaaccgggtatg
ccgtacagcaagaaggagatggtcaacctgctggaaggcatgcagtatcgccaggtcagc
cgcatgacgcgcccgggcgagtttaccgtgcaggccaacagcatcgaaatgctgcgccgc
ccgttcgacttcccggatggtaaagaagggcagatccgtgcccgcctcgatttccagaac
aaccgtctggcgaagatcgaaaacctggacagcggccgtagcttcggcttcttccgcctc
gatccgcgtcttatcaccatgctgcagtcgccgaacggtgaacagcgcctgttcgtgccg
cgttccggtttcccggatctgttggtagacacgctgatcgccacggaagaccgccatttc
tatgagcatgacggcatcagcccgtactccatcggccgcgcggtgctggccaacctgacc
gctggccgtgcggtgcagggcggcagtaccctgacgcagcagctggtgaagaacctgttc
ctgaccaacgagcgttcgctgtggcgtaaggccaacgaagcctatatggcgctgttggtg
gattaccgttacagcaaagaccgcatcctggagctatatctgaacgaggtgtacctcggc
cagagcggtagcgaccagatccgcggcttcccgctggccagcctgtattacttcggccgt
ccggtggacgagctgagcctcgatcagcaggcgttgctggtcggcatggtcaagggcgcg
tcgctgtataacccgtggcgcaacccgaaactggcgctggagcgccgcaacctggtgctc
aaactgttgcagaaccagggcgtgatcgacggcgagctgtatgacatgctgagcgcgcgt
ccgctgggcgtgcagccgaaaggcggcgtcattacgccacagccggcgtttatgcagatg
gtgcgtcaggaactgcaaaccaagctgggcgataaggtcaatgacctgtccggcgtgaag
atcttcaccacgctggatccggtgtcgcaagacgcggcggaaaaagcggtcgaagacggc
atcccggcgctgcgcgctgcgcgtcacctgcaggatctggaagcggcaatggtgatcgtc
gatcgcttcagcggtgaagtgcgcgccatggtcggcggcgccaacccgcagttcgccggc
ttcaaccgcgccatgcaggcgcgccgtctggtaggctcgctggccaagccgccgacgtac
ctgaccgcgctgtccgaaccggataaataccgcctcaacacctggctggcggatgcgccg
ctgtcgctgaaacagccgaacggcgccgtctggcagccgaacaactatgaccgtaaattc
cgcggtcaggtgatgctggtggatgcgttggccaactcgctgaacgtgccgacggtgaac
ctcggcctgtcggtcgggctggatcagatcagcgccacgctgcaacgcctggggatcccg
aaagcggagatcaatccggtgccttcgatgctgctgggggcgatcggcctgacgccgatg
gaagtcgcgcaggagtaccagaccatcgccagcggcggtaaccgtgcgccgctgtcggcg
gtgcgttcggtgatcgccgaagacggcacggtgctgtaccagagcttcccgcaggcggag
cgcatggtgccggcgcaggccgcttacctgacgctgtacgcgatgcagcagggcgtggcg
cgcgggacctcccgctcgctgtcggtgaagttcccgaactacaacctggcggcgaaaacc
ggtaccaccaacgatctgcgcgacagctggttcgccggcatcgacggcaaggaagtggcg
atcgcctgggtggggcgcgacaacaacggcccggccaagctgaccggcgccaacggcgcg
ttgaccctgtatcgccgctatctggaaaaccagacgccgctgccgctgatgctgcagccg
ccggaaggcataaaccagatgagcatcgactctgccggcaactttatctgcggcggcggc
agctggcgcaccatcccggtctggaccgacaatccgcagggattgtgccaggccagccag
gcggcggtgcagcaacagcagcaaccggcggcgggtgagcaaaaagatggcgatggcgtc
gccggctggatcaaggatatgttcggtcagtaa
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