Serratia sp. FGI94: D781_0683
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Entry
D781_0683 CDS
T02433
Name
(GenBank) 23S RNA-specific pseudouridylate synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
smaf
Serratia sp. FGI94
Brite
KEGG Orthology (KO) [BR:
smaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smaf03009
]
D781_0683
03016 Transfer RNA biogenesis [BR:
smaf03016
]
D781_0683
Enzymes [BR:
smaf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
D781_0683
5.4.99.29 23S rRNA pseudouridine746 synthase
D781_0683
Ribosome biogenesis [BR:
smaf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
D781_0683
Transfer RNA biogenesis [BR:
smaf03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
D781_0683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AGB81031
UniProt:
L0MEA8
LinkDB
All DBs
Position
complement(731595..732245)
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AA seq
216 aa
AA seq
DB search
MEPYNPPTDPLHILYQDAHIIVVNKPSGLLSVPGRAPENKDSLMTRIQADYPEAESVHRL
DMATSGVIVVALNKAAERELKRQFREREPKKSYVARVWGHLAQDEGLVDLPLICDWPNRP
LQKVCFDTGKAAQTEYRVLSRDADGSTRVLLTPITGRSHQLRVHMLALGHPILGDGFYAP
PAAKAMAPRLQLHAQELRITHPAFHTPMHFRAEADF
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggaaccctataatccccctaccgacccgctgcatatcctgtatcaggatgcgcatatt
atcgtggtcaacaagcccagcgggctgctgtcggtgccgggacgcgcgccggaaaacaaa
gacagcctgatgacgcgcatccaggccgattatcccgaggccgaatcggtgcaccggctg
gatatggccaccagcggcgtgatcgtcgtggcgctgaacaaagcggcggagcgcgagctg
aaacgccagttccgcgaacgcgagccgaaaaaatcctacgtggcccgcgtatggggccat
ctggcgcaggatgaaggattggtggatttaccgctgatttgcgactggccgaatcgcccg
ttgcagaaggtgtgttttgacaccggcaaggcggcgcaaacggaataccgggtgctgtcg
cgcgacgccgacggcagcacgcgggtactgctgacgccgatcaccgggcgttcacatcag
ctgcgggtgcatatgctggctctgggtcacccgatcctcggcgacggtttctacgcgccg
ccggcggccaaagcgatggcgccgcgtctgcagctgcatgcccaggagctgcgtatcacc
catccggcgtttcacacgccgatgcactttcgcgccgaagcggatttctga
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