Serratia marcescens SM39: SM39_4373
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Entry
SM39_4373 CDS
T03592
Name
(GenBank) putative carbohydrate-selective porin
KO
K07267
porin
Organism
smar
Serratia marcescens SM39
Brite
KEGG Orthology (KO) [BR:
smar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smar02000
]
SM39_4373
Transporters [BR:
smar02000
]
Other transporters
Pores ion channels [TC:
1
]
SM39_4373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Defensin_propep
Motif
Other DBs
NCBI-ProteinID:
BAO36300
LinkDB
All DBs
Position
complement(4560383..4561780)
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AA seq
465 aa
AA seq
DB search
MMKSLLPRSMTLAALALLCSQAQAETLQTGKDVEAPTAKWEGVALGFEPPQSGLLGDMLG
IRPILEDHGFHYNLGYLSQLSYNAGGGYNHDKQASYIDQFSLTFSQDLQALTGIPDAAIE
GNIVNRNHDNNLTRDRLQDPRVGLTDLSQESFGGQSITRLGWLTFSRSFLDRRLQWRIGM
MNKVQDFDQIIPCDFQTLTLCGGKSANSLTWYNWNVHYWGTTLQYKLTDGLTLKGGVMEQ
NPSAPSRSHAWSWSTKGSKGFLLPMELELKTHAVNQLPGVYNLGVLFTNARQSDLYEGVS
GGPGASDPQGYRSHDRTWFLYTGFNQQVTRHADDINRGLSVFYSLGLGDQRSNYLHWSTS
TGIRYRGLFDARPDDWLGLGVSVVKLSDRYKDNQRYLNQINGVSDYHDPSYRPVPGHSVT
AELYYRVNVTPWLQLQPGLQYWHHPAGVSETQDAWVTALKTVVTF
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaagcttattacctcgttccatgaccctggcggcgctggcgctgctctgtagc
caggcgcaggcggaaacgctgcaaaccggcaaggacgtcgaagcccccaccgccaagtgg
gaaggggtggcgctcggctttgaaccgccgcagtccgggctgttgggggatatgctgggg
atcaggccgatcctggaggatcacggtttccactataacctcggctacctcagccagctg
tcgtataacgccggcggcggttataaccacgataaacaggcgtcgtacatcgaccaattc
tcgctgaccttcagccaggatttgcaggcgctgaccggcattccggacgcggcgatcgaa
ggcaatatcgtcaaccgcaaccatgacaacaacctgacccgcgatcgcttgcaggatccg
cgcgtcggcctgaccgatctgtcgcaggagagctttggcgggcagtcgattacccgcctg
ggctggctgaccttcagccggtccttcctcgatcgccggctgcagtggcgcatcggcatg
atgaacaaggtgcaggatttcgatcagatcatcccctgcgattttcagacgctgacgctg
tgcggcggcaagtccgccaactcgttgacctggtacaactggaacgtgcattactggggc
accacgctgcaatacaagctgaccgacggcctgacgctcaagggcggcgtgatggagcag
aacccgagcgcccccagccgcagccacgcctggagctggtccaccaagggcagcaaaggc
ttcctgttgccgatggagctggagctgaaaacccacgccgtcaaccagctgccgggggtg
tataacctgggcgtgctgttcaccaacgcgcgccagagcgatctttatgaaggggtgtcc
ggcgggccgggcgccagcgatccgcagggctatcgcagccacgatcgcacctggttcctg
tataccggtttcaaccagcaggtgacgcgccatgcggacgacataaaccgcggtctgagc
gtgttttacagcctggggctgggggatcagcgcagcaactacctgcactggtctacctcg
accggcattcgctatcgcgggctgttcgatgcgcggccggacgactggctggggctgggc
gtctcggtggtgaagctgagcgaccgctataaagataatcagcgttatctcaaccaaatc
aacggcgtcagcgattatcacgatccgagctaccggccggtgccggggcactcggtgacg
gcggagctctattatcgcgtgaacgtcacgccgtggttgcagctgcagccgggcctgcag
tactggcatcacccggcgggcgtcagcgagacgcaggacgcctgggtgacggcgttgaaa
acggtggtgaccttctga
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