Serratia marcescens SM39: SM39_4832
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Entry
SM39_4832 CDS
T03592
Symbol
holC
Name
(GenBank) DNA polymerase III, chi subunit
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
smar
Serratia marcescens SM39
Pathway
smar03030
DNA replication
smar03430
Mismatch repair
smar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SM39_4832 (holC)
03430 Mismatch repair
SM39_4832 (holC)
03440 Homologous recombination
SM39_4832 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smar03032
]
SM39_4832 (holC)
03400 DNA repair and recombination proteins [BR:
smar03400
]
SM39_4832 (holC)
Enzymes [BR:
smar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SM39_4832 (holC)
DNA replication proteins [BR:
smar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SM39_4832 (holC)
DNA repair and recombination proteins [BR:
smar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SM39_4832 (holC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
BAO36745
LinkDB
All DBs
Position
complement(5043425..5043874)
Genome browser
AA seq
149 aa
AA seq
DB search
MKQATFYLLDNAEPSGALSAHEAVACAVAANGFRSGKRVLIACESQEQAQRLDEALWQRE
PHEFVPHNLAGEGPHYGAPVELCWPGKRGNAPRDLLIALLPQFADFATAFHEVVDFVPYE
DTLKQLARDRYKAYRSVGFHLTTATPPTH
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaggcgacgttttatttgctcgacaacgcggaaccgtctggtgcgctcagcgcc
catgaggccgtggcctgcgccgttgccgccaacggcttccgttccggcaagcgggtgctg
atcgcctgcgagagccaggagcaggcccagcggctggacgaagcgctgtggcagcgcgag
ccgcatgaattcgtgccgcacaacctggccggcgaagggccgcactacggcgcgccggtg
gaactgtgctggcccggcaagcgcggcaacgccccgcgcgatctgctgatcgccctgctg
ccgcagtttgccgattttgctaccgctttccatgaagtggtagacttcgttccttacgaa
gacactctgaaacagttggcgcgcgaccgttacaaggcctatcgcagcgtcggcttccat
ttgaccacggctacgccgccaactcactga
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