KEGG   Serratia marcescens SM39: SM39_4832
Entry
SM39_4832         CDS       T03592                                 
Symbol
holC
Name
(GenBank) DNA polymerase III, chi subunit
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
smar  Serratia marcescens SM39
Pathway
smar03030  DNA replication
smar03430  Mismatch repair
smar03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:smar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SM39_4832 (holC)
   03430 Mismatch repair
    SM39_4832 (holC)
   03440 Homologous recombination
    SM39_4832 (holC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:smar03032]
    SM39_4832 (holC)
   03400 DNA repair and recombination proteins [BR:smar03400]
    SM39_4832 (holC)
Enzymes [BR:smar01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SM39_4832 (holC)
DNA replication proteins [BR:smar03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SM39_4832 (holC)
DNA repair and recombination proteins [BR:smar03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SM39_4832 (holC)
SSDB
Motif
Pfam: DNA_pol3_chi
Other DBs
NCBI-ProteinID: BAO36745
LinkDB
Position
complement(5043425..5043874)
AA seq 149 aa
MKQATFYLLDNAEPSGALSAHEAVACAVAANGFRSGKRVLIACESQEQAQRLDEALWQRE
PHEFVPHNLAGEGPHYGAPVELCWPGKRGNAPRDLLIALLPQFADFATAFHEVVDFVPYE
DTLKQLARDRYKAYRSVGFHLTTATPPTH
NT seq 450 nt   +upstreamnt  +downstreamnt
atgaaacaggcgacgttttatttgctcgacaacgcggaaccgtctggtgcgctcagcgcc
catgaggccgtggcctgcgccgttgccgccaacggcttccgttccggcaagcgggtgctg
atcgcctgcgagagccaggagcaggcccagcggctggacgaagcgctgtggcagcgcgag
ccgcatgaattcgtgccgcacaacctggccggcgaagggccgcactacggcgcgccggtg
gaactgtgctggcccggcaagcgcggcaacgccccgcgcgatctgctgatcgccctgctg
ccgcagtttgccgattttgctaccgctttccatgaagtggtagacttcgttccttacgaa
gacactctgaaacagttggcgcgcgaccgttacaaggcctatcgcagcgtcggcttccat
ttgaccacggctacgccgccaactcactga

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