Candidatus Sulfurimonas marisnigri: HUE87_09310
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Entry
HUE87_09310 CDS
T07564
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
smas
Candidatus Sulfurimonas marisnigri
Pathway
smas00521
Streptomycin biosynthesis
smas00523
Polyketide sugar unit biosynthesis
smas00541
O-Antigen nucleotide sugar biosynthesis
smas01100
Metabolic pathways
smas01110
Biosynthesis of secondary metabolites
smas01250
Biosynthesis of nucleotide sugars
Module
smas_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
smas00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HUE87_09310 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HUE87_09310 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HUE87_09310 (rfbC)
Enzymes [BR:
smas01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HUE87_09310 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QOY54074
UniProt:
A0A7S7RPZ2
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All DBs
Position
complement(1837774..1838349)
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AA seq
191 aa
AA seq
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MIFKRTSITDVIILEPTIHGDERGYFVETFRQDKLDFFLGYKIKFCQDNESKSSKGVLRG
LHYQLAPYAQTKLVRVIAGKVLDVAVDIRKNSPTFGQHVAVELSGENKRQLLVPRGFAHG
FVVLEDNTTFAYKVDNYYSPQCDRGIAFDDKDLNINWQIEYSELNLSPKDTKQPKLSQIN
DLFEFGENYYV
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgatatttaaaagaacatctatcaccgatgtaataattttggaaccaactattcatggt
gatgaaagaggttattttgtagaaacttttcgccaagataaattagatttttttttgggt
tataaaataaaattttgtcaggataatgaatcaaaaagctcaaaaggagttttaagaggt
ttacactaccaattagctccatatgctcaaacaaaattagttcgtgttattgctggaaaa
gttttagatgttgcagtagatatacgaaaaaactcacctacatttggacaacatgtagct
gttgaattaagtggtgaaaataaaagacaattattagttccacgaggttttgcacatggc
tttgtagtacttgaagataatactacatttgcatacaaagtagacaactactattctccc
caatgtgatagaggaatagcatttgatgataaagatttaaatattaattggcaaattgaa
tatagtgaattaaacttatctcctaaagatacaaaacaaccaaaattatcacaaataaat
gacttatttgaatttggagaaaattattatgtttaa
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