Scophthalmus maximus (turbot): 118284522
Help
Entry
118284522 CDS
T09850
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25
KO
K12006
tripartite motif-containing protein 16
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118284522
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118284522
BRITE hierarchy
Motif
Pfam:
zf-C3HC4_4
PRY
zf-C3HC4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_6
PI3K_P85_iSH2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
118284522
NCBI-ProteinID:
XP_035463182
LinkDB
All DBs
Position
20:complement(1670020..1672733)
Genome browser
AA seq
489 aa
AA seq
DB search
MAQQGIQLDQEKLCCSICLDLLKQPVTIPCGHSYCVKCIESYWDEEGQKENHSCPQCRQA
FMLRPVLVKNTVLADLVEELKKKTGPQAAPADHGCAGPGVVACDVCTGRQLKAVKSCLQC
LVSYCEQHVQPHYDSPAFGKHKLVEPSEKLQENVCTRHCEVTKIFCRTDRQLICYLCSMD
EHRGHDAVSAKAEIAERRGELGARRQSIQQKIQSRERGVKLLQREIAALKKQDIELEQLE
HTEDPTQFLHRYTSLSRPGDAADAGSEVRDEPRDVLSEEWTESPPRGGAEVDDSLLPRGE
LKTRAEFFKCSRQITLDPNTAHHYIAIDRGVKARCRPKNPEYPIHPDKFTSCSQVLSREG
LTGRCYWEVKWDTREVFVAVAYKSIKRAGEESAFGNNDKSWALQCWQSGYELTHNSVRTA
ISGPESSRVGLYVDHGAGTLSFYSVSDTGTMTLLHTVYTTFRQPLCAGLGMYVNGASAEI
YTALDMKKD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaaggaattcagctggaccaggagaagctctgctgctcgatctgtctggat
ctactgaagcagcccgtgaccatcccctgcggacacagctactgtgtgaagtgtatcgag
agctactgggacgaggagggtcagaaggagaaccacagctgccctcagtgtagacaggcc
ttcatgctgaggcctgtcctggtgaagaacaccgtgttagcagatctagtggaggagctg
aagaagaagactggacctcaagctgctcctgctgatcacggctgtgctggacccggagtc
gtggcctgtgatgtctgcacaggcagacagctgaaagctgtcaagtcctgtctgcagtgt
ctggtgtcttactgcgagcagcacgtccagcctcactacgactccccggcctttgggaag
cacaagctggtcgagccgtccgagaagctccaggagaacgtgtgcacgcgtcactgtgag
gtgacgaagatcttctgccgcaccgaccgacagctcatctgttacctctgctccatggac
gaacacaggggccacgacgcggtgtccgccaaggcggagattgccgagaggcgcggggag
ctcggcgcgaggcggcagagcatccaacagaagatccagagccgagagagaggcgtgaag
ctgcttcagcgggagatcgcggcgctgaagaagcaagacattgagctggagcagctggag
cacaccgaggatcccacccagtttctgcaccgctacacctcgctgtcacgccccggcgac
gccgcagacgcggggtcagaggtcagggacgaaccgcgggacgtcctgagcgaggagtgg
accgaaagcccgccgagaggaggagccgaagtggatgactcactgctgccacgaggcgag
ctgaagaccagagcggagttcttcaagtgttcccgtcaaatcacactggatccaaacact
gcacaccattacattgcaatcgacagaggagtaaaagctagatgtcggccaaaaaaccca
gaatatcctatacacccagataaattcactagctgttctcaggttttgagcagagaaggt
ctgaccggacgttgttactgggaggtgaagtgggatacgcgtgaagtttttgtggcagtc
gcatacaagtctattaaaagagcaggagaagaaagtgcatttggaaacaatgacaagtct
tgggcactacaatgttggcagtctggttatgaattaacacataacagtgtcagaactgcc
atctcaggccctgagtcctccagagtcggactgtacgtggatcacggtgcaggcactctg
tccttctacagcgtctctgacactggcaccatgacgctcctgcacacagtctacaccacg
ttcagacagccgctctgtgctggactcggcatgtatgtcaacggagcatctgctgaaata
tatactgcattagacatgaagaaggattga
DBGET
integrated database retrieval system