Scophthalmus maximus (turbot): 118288292
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Entry
118288292 CDS
T09850
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smau03041
]
118288292
Spliceosome [BR:
smau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118288292
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
Motif
Other DBs
NCBI-GeneID:
118288292
NCBI-ProteinID:
XP_035470122
EnsemblRapid:
ENSSMAG00025003668
LinkDB
All DBs
Position
17:complement(5950825..5993181)
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AA seq
466 aa
AA seq
DB search
MLMSTDVASIMLPVSRGILDRERDVDPAAGPHASAAGLPAAVRGMKRGDPEPDAQAAAVL
TDSAGAECKRARIDGTGTVVGDIGQNNEPLNPGFHGYPPHSQGSQDSTGGQEGLVAPPFA
AFPPPPPPQNGLPVTEFVPGAMFGAGGQVTAEVGVGANGAATATTNNGGNNGKTDETSQG
EAGVQCGAGGAGAGGSAGDPSEAKGTPKRLHVSNIPFRFRDPDLRQMFGQYGKILDVEII
FNERGSKGFGFVTFETSADAENARGKLHGTLVEGRKIEVNNATARVMTNKKMVSPYPNGE
ALSTLPYAGWKLSPMMGAMYGPELYAVPGFPYPSAAAATNAAAAAAAFRGAHLRGRGRPV
YSAVRAAVPQPAIPAYPGVVYQDGFYGAADLYGGYPAAAAAAAAAYRYAQPTAVTGATAA
AAAYSDSYGRVYTTDPYHALSPAAAAYGVGAMASLYRAGYSRFAPY
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgtcgcatccataatgctgcccgtcagccgggggatactggac
cgggaaagggacgtcgacccggcggccggaccccacgcgagcgcggccgggctcccggcc
gctgtgcggggcatgaagcgaggggacccggagcccgacgcgcaggcggccgccgtgctg
accgactcggccggggcggagtgcaagagagccaggatcgacggcaccggcaccgtcgtc
ggggacatcggacagaacaatgagccgctaaaccccggtttccatggatacccacctcac
agtcagggctctcaggattcgacaggaggacaggagggtttggtagccccaccctttgca
gcattccctcctccacccccacctcaaaacggactcccagtgacggagttcgtccccggg
gccatgtttggtgctgggggccaagttacagcagaggtaggggttggcgctaatggagcc
gccactgccaccaccaacaatggcggcaacaacggaaagacagacgagacatcccagggg
gaggcgggggtccagtgtggagcaggaggtgcaggagcaggaggctctgcaggagacccc
tcagaggccaaagggacccccaaacgcctgcatgtctcaaacatccccttccgcttccgg
gacccagatctcaggcagatgtttgggcaatatgggaagattctggatgtagagattatt
ttcaatgagaggggttcaaagggttttggctttgtgacgtttgagaccagcgcagatgca
gagaacgccaggggaaagctccacggcacgttggtggaaggtcgtaagattgaggtgaat
aacgccaccgccagggtgatgactaacaagaaaatggtcagcccttaccctaacggagag
gctctcagcacgctgccttacgcggggtggaaactcagtcccatgatgggggccatgtac
ggaccagagctgtacgcagtcccagggttcccctacccttcagcagcagcagccacaaat
gcagcagcagcagcagcagcgttccgcggtgcccacctccggggccgaggtcggcccgtc
tacagcgccgtgcgtgctgctgtgcctcagcccgccatccctgcctaccctggtgtggtg
tatcaggatgggttttacggagctgcggacttgtatggaggctaccctgctgccgccgcc
gccgctgctgccgcctaccgctacgctcagcccacagctgtaactggagcaactgctgcg
gctgccgcctacagtgacagttatggccgggtgtacactacagacccctaccacgcttta
tctccggctgctgcagcttatggagtgggagccatggccagtttataccgggcaggatac
agtaggtttgctccgtactaa
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