Scophthalmus maximus (turbot): 118300647
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Entry
118300647 CDS
T09850
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smau03021
]
118300647 (chd1)
03036 Chromosome and associated proteins [BR:
smau03036
]
118300647 (chd1)
Transcription machinery [BR:
smau03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
118300647 (chd1)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
118300647 (chd1)
SLIK complex
118300647 (chd1)
BRITE hierarchy
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
HDA2-3
DEAD
DUF1388
Motif
Other DBs
NCBI-GeneID:
118300647
NCBI-ProteinID:
XP_035481130
EnsemblRapid:
ENSSMAG00025003342
LinkDB
All DBs
Position
2:6158465..6182766
Genome browser
AA seq
1799 aa
AA seq
DB search
MAGRSEDESVSNSSGESSNSDDESGSGSGSASGSGSGSSSSSSSSSSQSGSSDSGSGSDS
GSQSDSDTEKSKEKMEPPNKSNIDGAEFWKSNPSILAVQRSAMLRKQQLQQQQQQLQQRQ
SSSNSGSDEDSSSDDSDSSSGSKRRRNSGSSDSGSGSGSGSGSGSASSAEDNSDETASDY
EPSHKIKSRKPPNKMNFRNGKKSSTQKKKNKKCSSSDDEDDHYKKVASAGPRRQATVNVS
YKEDEELKTDSDDVVEVLGEDVPQPEEDEFETLERVMDCRIGRKRATGSVTTVYAVEADG
DPNSNFNPNKEAGDVQYLIKWKNWAHIHNTWETEDTLKLQNVKGMKKLDNFKKKEQEKRK
WLKAASPEDIEYFNCQEELIDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYSEC
SWEDGCLIGKKFQKCIDDYMSRNQSKCIPFRDCKVLKQRPRFVPMKKQPSYIGGDGLELR
DYQLDSLNWMAHSWCKGNSCILADEMGLGKTIQTIGFLNYMFNDHQLYGPFLLVVPLSTL
TSWQREIQLWAPQMNVVVYLGDISSRNMIRTHEWMHVHNKRLKFNILLTTYEILLKDKSF
LGNVNWAFIGVDEAHRLKNDDSLLYKTMMDFKSNHRLLITGTPLQNSLKELWSLLHFIMP
EKFHSWELFEEDHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQ
KQYYKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPEDNEFLNRAEALQL
LIRSSGKLVLLDKLLVRLKERGHRVLIFSQMVRMLDILADYLRSRQFLFQRLDGSIKGEM
RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG
QKRQVNIYRLVTKSSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSAPFNK
EELSAILKFGAEELFKEPEGEEQDPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVA
NFTMMEDEEIDIDSERSHRSWDDIIPEEQRRRMEEEERQKELEEIYLLPRMRNCAKQISF
NAGEGRQSRNRRYSGSDSDSPSDRKRPKKRGRPRTIPRENIKGFNDAEIRRFVKSYKKFG
GPLERLDAIARDAELVDKSEHDLKRLAETVHNGCVRTLRENPCGPDKTSGGRRGKVKGPT
FRISGVQVNAKLVISHEEELAPLHKAIPADPEERKKYMIPCHSKAAHFDIEWGKEDDSSL
LIGIYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKRE
AQKQAGTANSRKRKPRSKKSKTLKPTKTDEVIKSPSSDPPSDKRSDDEEDVQEKKEMAPL
KPPSRRSRADRVVVKEEEEEEDDDDDEEEPEQEEVSSSGEREVKEKEMKKDGKKEKKEES
YDIKETKEPREKKETKALETVTKQEESSDKNEVKDRTKKVSDVPVHITASGENVPISEES
EELDQRTFSVCKERMRTVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYS
NPDQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQENAQAMEQNTRTSNTHSYKHA
DVDRLKDNAHQDESSRDSYGSDRHQAIGRYHESSGSKERHSSESHRKTAGGESRKRPYSS
FSNGKDHRDRDHYRPDSRDRERQDRFYSDGKHRKLEEFRSSSRDHRLDMKDYSHSDQRSS
YRYHSDWQTEQRASASGPRSPRDQRSPYDARSPMGHRSPFDYSSDHKSTPEQIWSSRKT
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgcagtgaggatgagagtgtaagcaacagcagtggagaatcaagtaattct
gatgatgaatctggttctggatcgggatccgcatcagggtccggctcaggctccagttcc
agctcctccagcagcagcagccaatcaggaagcagtgactcaggaagtggttcagactct
ggcagccagtcagactctgacacagagaaatccaaggagaagatggaaccaccaaataag
tcaaacattgatggagctgagttctggaagtccaatcccagtattctagcggtgcagagg
tccgcaatgctccggaaacagcagcttcaacagcagcagcagcaattgcagcaaagacaa
agctcctcaaacagtggatctgatgaggactcatcaagcgatgactctgattcatcaagt
ggatccaaaaggagaagaaattcaggttcctctgactctggatcaggttctggttctggg
agtggttctggatcagcctcatcagcagaggacaacagcgacgaaaccgcgtccgactat
gagccaagtcacaaaatcaaaagcagaaaacctccaaacaagatgaattttcggaatggg
aagaaaagcagcactcagaagaagaaaaacaagaagtgctcttcttctgatgatgaggac
gatcactacaagaaggtggcgtctgcaggaccacggcggcaggccacggtcaacgtcagc
tacaaggaggatgaggaactgaagacggactcggacgatgtggtggaagttctgggtgaa
gatgtcccacagccagaggaagatgagtttgaaacgctggagagagtgatggattgcagg
atagggaggaaaagagcaacggggagtgtgaccaccgtatacgctgtagaagcagacggg
gaccccaattccaacttcaatcccaacaaagaggctggtgatgtccagtacttgataaag
tggaagaactgggcccacatccacaacacctgggagacggaggacacgctcaagttgcag
aatgtcaagggcatgaaaaaactggacaacttcaagaagaaggaacaggaaaaaaggaaa
tggttgaaggcagcttcaccagaggatattgaatatttcaactgtcaggaagaattgatt
gatgacctgcactctcagtaccagttggtggagagaatcataggccattcaaaccagaag
tcagcagctggttacccagactacctgtgcaagtggcagggcttaccgtactcggagtgc
agctgggaagacggttgtctgattggcaaaaagttccagaaatgtatcgatgactacatg
agcagaaaccagtccaagtgtattccattcagggactgcaaggtgctcaaacagagaccc
aggtttgtgcccatgaagaagcagccatcttacataggaggtgatggactggagctccga
gattaccagctggacagtttgaactggatggctcactcctggtgcaaaggcaacagttgt
atccttgctgatgagatgggtttagggaagaccatccagaccatcggcttcctcaactac
atgttcaatgatcaccagctgtacgggcccttcctgctggttgtgcctctctccacactg
acctcctggcagcgagagatccagctgtgggcccctcagatgaacgtcgtggtctacctg
ggagacatcagcagtaggaacatgatcaggacacacgagtggatgcatgtccataacaag
agactaaagtttaacatccttctcacgacatacgagattcttctcaaagataagtcattt
ttgggcaatgttaactgggccttcattggtgtggatgaggcgcaccgactgaagaacgat
gactccctcctctataagaccatgatggacttcaagtccaatcacaggcttctgatcaca
ggaacaccactgcagaactcactgaaggagctgtggtccctgctgcacttcatcatgccc
gagaagtttcactcctgggagctgtttgaggaggatcacggtaaaggaagagattcaggc
tacaccagtctgcacaaagaactggaaccttttctactgcgcagggtcaagaaggacgtg
gagaaatcccttcctgccaaagtggagcagatcctccgagtcgagatgagcgctatccag
aaacagtattacaaatggatcctgaccaggaactacaaggctcttagtaaaggtaccaaa
ggcagcacatcgggtttcctgaacatcatgatggagctgaaaaagtgttgtaaccactgt
taccttatcaagcccccggaggacaacgagttcctcaacagagccgaagccttacagcta
ctaatccgcagcagtgggaaacttgttttgctggacaaactattggtgcgtttgaaagag
cgaggccacagagttctcattttctcccagatggtacgcatgctggacatcctggctgat
tacctgaggagcagacagttcctcttccagagattagatggctccatcaaaggagagatg
aggaagcaggccttggaccacttcaatgctgagggctcagaggatttctgcttcttgttg
tcgacgcgtgcgggcggtctgggtatcaacctggcgtcggctgacacagtagttatcttt
gactccgattggaacccccagaacgatctgcaggctcaggccagagcccacaggatcgga
cagaagagacaggtgaatatctaccgtctggtgacgaagagctccgtggaggaggacatc
attgagcgggcgaagaagaagatggtgctggaccaccttgttattcagaggatggacacc
acagggaaaactgtcctccacactggtgctgctccctccagctcagcaccgttcaataag
gaggagctctctgccatcttgaagttcggtgcagaggagcttttcaaagagcctgagggt
gaagagcaggatccccaggaaatggacattgacgagatcctcaaaagagcggagactagg
gagaacgaccccggaccctccactgtgggagaagaactgctgtctcagttcaaggtcgcc
aacttcaccatgatggaggatgaggaaatagacattgattctgagcgtagtcatcggagc
tgggacgacatcattccagaggagcagaggaggaggatggaggaagaggagagacagaag
gagctggaggaaatctacctgctgcctcgtatgaggaattgtgctaaacagatcagcttt
aacgctggggagggtcggcagagcaggaacaggagatactcgggttcggacagcgactcc
ccctcagaccgaaagaggccaaagaaacgagggcggcccaggaccatcccgcgagaaaac
atcaagggcttcaatgatgctgagatccggaggtttgttaagagttacaaaaagtttgga
ggaccactggaaaggttggatgctattgctcgtgatgctgaacttgtagataaatctgaa
catgacctgaagcgcttggcagagacggttcacaacggctgtgtgagaacactacgagaa
aatccctgtggaccagacaagacctcaggaggcagaagagggaaggtgaaaggcccaaca
ttcaggatctctggtgtccaggttaatgccaagcttgttatatcgcacgaggaagagctg
gctccgctccacaaggccatccctgccgaccccgaggagagaaagaagtacatgattccc
tgccactcgaaggcagcacactttgacattgagtgggggaaggaagacgactccagcctc
ctcataggaatctatgagtacggttatggcagctgggagatgatcaagatggacccagac
cttaatctcacacacaagctcctaccagacgacccagacaagaagccacaggccaaacag
ctgcagaccagagcggactacctcattaagctcctgagcaaagacctcgccaagagagaa
gctcagaaacaggccgggaccgccaattcacggaagaggaagccaagaagtaaaaaaagc
aaaactttgaagccgacaaagacggacgaggtgatcaagagtccgtcctcagatcccccg
tcagacaagaggtccgatgatgaggaggacgtgcaggagaagaaggagatggcaccactg
aagccaccgagcagacggagccgagcagacagggtggtggtaaaggaggaggaagaggag
gaggatgacgacgacgatgaggaagagcctgagcaggaggaggtttcttcatcaggggag
agggaggtcaaagaaaaagagatgaaaaaagacggcaaaaaggaaaagaaggaggaaagt
tatgacataaaagaaacaaaggagccgagagagaaaaaagaaaccaaggctctggaaacg
gttactaaacaagaggagagcagcgacaagaatgaagtgaaagatcggacgaagaaagtc
tctgatgttccggttcacatcacagccagtggagagaatgttccgatatccgaggagtct
gaggagctggaccagaggaccttcagcgtgtgtaaagagcggatgcggacggttaaggcg
gccctgaagcagctggaccggccggagaaagggctgtcagagcgtgagcagctggaacac
acacgacagtgtctcattaagatcggggaccacatcaccgagtgtctgaaggaatattca
aatcctgatcagatcaaacagtggagaaaaaacctttggatatttgtttctaaattcact
gagttcgatgccagaaaactacataaactgtacaagcatgccatcaagaagagacaagag
aacgcccaggcaatggaacagaacactagaacttcaaacacccacagctataaacatgca
gacgtcgaccggctgaaggacaacgctcaccaggacgagagcagcagggacagctacggc
tccgacaggcatcaggccattggtcgataccacgagagcagcggcagcaaggagaggcac
agttccgagtcccacaggaagacggcaggaggggagtcgcggaaaagaccctactcctcc
ttcagcaacggaaaagaccaccgagacagagaccactacagaccagacagcagggacaga
gagcggcaggacagattctacagtgacggtaagcacaggaagctggaggagttccgcagc
agtagcagagaccaccggctggacatgaaggattattcccactctgaccagcgctcatcc
tatcgctaccactcagactggcagacagagcagcgagcatcagccagcgggccccgctcc
cctcgagaccagcgctcgccctacgacgcccggtcacccatgggccaccgctcaccgttc
gactactcgtcggaccacaagagcacgccggagcagatctggagcagccgcaagacataa
DBGET
integrated database retrieval system
