Scophthalmus maximus (turbot): 118301926
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Entry
118301926 CDS
T09850
Symbol
tp53bp1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118301926 (tp53bp1)
BRITE hierarchy
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
RTT107_BRCT_5
Tudor_5
Tudor_3
DUF4537
Tudor_2
BAHCC1-like_Tudor
Motif
Other DBs
NCBI-GeneID:
118301926
NCBI-ProteinID:
XP_047187439
EnsemblRapid:
ENSSMAG00025006340
LinkDB
All DBs
Position
4:1406200..1422548
Genome browser
AA seq
1716 aa
AA seq
DB search
MDPGGSELDSSLPQPENPCLIVEDSQPDSVALEDDPESSYRALLARRLSDLQPAARSPVL
ELISSPLGSRCSQTDSQSESSQSNSQAEPIGVLTATNTSSAFQEESQVINLCPPPVKKKK
SAPEDADMDSGADSTTHCCSATDEGTSQFGFLELSQSQDLRGGEAANSQQGETAAQPDSE
RRSKTAVGVLKSRLISTCSSSPSDQNTSSRTSASQENKSLRSEVSSSSSLDSPAPSGRTL
SVQALLHSQGLQASGEQEQQDGEVPSSQDDLFDTDKTGAAVDSTVSEPEQQQRQPTATPS
CTLRLLHLSGQGTLAQDSLSQSSVDYVAPTPDNFSHTPLIVPSSPTGPENEHGADEPMDT
SLPPDDGAGEKEEQPMEMEAASKPHPSASTPVSQNPPGFALERTFSLPSQPEFSHDVFVP
TQSQETLRQSDKKSSLSTASQQPESAPLLTSPLQLSVNTEQIDEDSQATQIEEVEETPGV
DAGDSVTSCRGDAVVSQSRVDTSSKASAESQKSDVHEKAATSLNVVNVNVTEVKSDTSSC
SQPKLGSPGPTVNSCVQETPLDATPGSPPSQSVISQTSVVDVARSSEDVKGGGTTASQQC
GAVGNSQTDNVMTQEEVVVMEEEEEEASAGGGGASGIDLVLSQSELLSPEPMEEEEEDGE
EPAADSVIVVTDSERDSQILKKDVTPPAKSNSSQPIRGDVAASTNGHESQAEKTKKKVNA
APDGMEAEGLKDKSLSDSSGEISFHFTLPKEGELIGPAPGTTPPLINQLKQRLRHSTPIE
ISPFSEKSDLVADVSADVAMAAGDNIVSGDGACEDGTEQGDGKLSLRMKLVTPVGEGSSE
TFSLQKPALSEEDGSVVKVTTVSKAVTSPSVFSRVRQVHRQREAEGDSQPAGNASPVRGE
LFASPQRSSQASSLGCNSLPNSQPEPSSQETPAAAPPPPQHQQKTPSPAEGRRAPPGVSE
PPTPNSADVRQKVVSQNTVSSSPSNKLRQRTVSQQTSGLDAAGLRSPAGRGEPESPSFRR
TAGPSHCRHVRTVQEVRTTVTRIITDVYYEDGKEVERKVREENEEPVVDCHVLDSDISPC
RTGSSSMTSGDLGDISSLSSKASSLQHSSGGTSSSTGFTRPDFLMPSGRGARSFSPRRGG
GHQRRGHRGHRAGSVITVGDRGYGALGSRGFVPLTPRGRARRGRPPSRYSLSRGGGSFQR
IGAQQHSSSEDEPFTRMLPPRLPASPTDGEPPSRSDSLRSSPEEGGSAAGRSSFVGLRVV
AKWSSNGYFYSGRIVKDAGEGSFRLRFDDGYECEVEGKDILLCDPIPLETEVTALLEDEY
FSIGVVRGHKTEGQDLFYSVERDGQQQWYNRTSVILSLEQGNRLREQHSLGPYEPAAPLA
KASDISLDNLVEGKRRRRVTLGGPDTPNRSSSSSPRTPGPSGKRKLRTTSEDDRTPAKRG
RRGPGARAVQRVGACNTSGSGTDLPGPSGDAADTHGPLPQNASLFLGFAFMLTASSESDR
LTNLLTAGDDDDDYVQTSPYNKAYTESQLQAGGGFVLPDFNEEQCKAAYQSLLIADQHCR
TRKYLQCLASGVPCVSHVWVRDCCKENKLLNYRNYLLPAGVGPDAAVVEWHPRCSPFKAL
RVLLVFEEPVELWAQLVTMGGASSVRQFQGDKDGSDIPTGKYDVVVTDRACPPLVEKSVT
SQDVPLVSPEWIIESVIGGERLGFRSKPQYRHDYAS
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggcggaagtgaactggactccagcctgcctcagcccgagaacccgtgtctg
atcgtggaggactcgcagccggacagcgtcgcgctggaggacgaccccgagagcagctac
cgagccctgctggcccgccgcctgtccgacctgcagcccgccgcccgcagcccggtgctg
gagctgatctcctcgcctctcggaagcagatgctctcagaccgacagccaatcagagagc
tcgcagagtaacagtcaggccgagcccataggtgtcctcacggcgaccaacaccagctca
gcgttccaggaggagagtcaggtcataaacctctgtccgcctccggtcaagaagaagaag
agtgcaccggaggacgcggacatggattccggagcggactccactacacactgctgcagc
gcgaccgatgagggaacctctcagttcgggttcctcgagctctctcagagtcaagatctg
cgcggtggcgaggcggcgaacagtcagcagggggaaacggccgcgcagcccgacagcgag
agacgcagcaaaacagctgttggtgttctgaaaagtcgattgatttctacctgctcttcg
tcaccgtcagatcagaacacgagctccaggacttcagcgagtcaggagaacaaatccctg
agatcggaggtgagctccagcagctcgttggactctccggctccgtcgggcaggacgctc
agtgtccaggctctgctgcactcgcagggcctccaggcgtccggtgagcaggagcagcag
gacggcgaggtcccgtcctcgcaggacgacctgttcgacaccgacaagacgggcgctgca
gtcgacagcacggtgtctgagccggagcagcagcagcgtcagccgaccgcgacaccgtcc
tgcaccctgcgactgctgcacctctctggccagggaacgctggcgcaggacagtctgtcc
cagagctccgttgactacgttgcaccgactccagacaacttcagccacacgcctttaatc
gttcccagctcaccgaccggaccggagaacgaacacggtgccgacgaaccgatggacacg
tcgttgcccccggacgacggagcgggagagaaggaagagcagccaatggaaatggaggcc
gcctccaagccacacccgtccgcctcgacgcccgtgtcccagaatccccctggtttcgcg
ttggagcgcactttctctttaccctcccaaccagagttctctcatgacgtgtttgtcccg
acacagagccaggagacactgcgacagtcggacaagaagtcgtcgttgtcgacggcgtct
caacagccggagtcggctcctctcctcacgtcgcctctccagctctcggtgaacacggag
cagatcgacgaggacagtcaggccacgcagatagaggaagtggaagagacgcccggtgtc
gacgccggcgactctgtgacttcctgtcgcggcgacgccgtcgtctcgcaatcacgagtc
gacaccagttcgaaagcctctgctgagtcacaaaagtctgatgtgcacgaaaaggcggcg
acttctttgaatgtagtaaatgtgaatgtaaccgaggttaagagcgacacgtcgtcctgc
tcgcagccaaagctcggttcccctggtccgactgtgaacagctgtgtgcaggagacgccc
ttggatgcgacgcccggcagtccgccctcgcagtccgtcatctctcagacatccgtcgtg
gacgtggcgaggagctccgaggatgtgaagggagggggaacaaccgcgtcgcagcagtgt
ggggcggtcggtaacagccagacggacaacgtcatgacgcaggaggaagtggtggtgatg
gaggaggaagaggaggaggcgagtgcaggaggaggcggggcttcggggattgatctagtt
ctgtcccagagtgagctgttgtctcctgagcccatggaggaggaggaggaagacggtgaa
gagccggcggcggacagcgtcatcgtggtcacagacagcgagcgagactcccagattctg
aagaaggacgtgacaccaccggcaaagagcaacagctctcagccaatcagaggcgacgtt
gccgcctccaccaacggccacgagtcccaggcagagaagacgaagaagaaggtgaacgcg
gctcctgacgggatggaggcagaagggctgaaagacaagagcctcagcgacagctcggga
gagatttctttccacttcacgcttcccaaagaaggcgagctgattggtcccgcccccggc
accacgcctcctctcatcaaccaactgaagcagaggctcagacacagcacgcccatcgag
atctcgcccttctcagagaagtccgacctggtggctgacgtgtccgctgacgtggcgatg
gccgccggcgacaacatcgtgtccggcgacggcgcgtgcgaggacgggacggagcagggc
gacgggaagctgagtctgaggatgaagctggtgacgccggtcggcgagggaagctcggag
acgttcagtctgcagaagccagcactgtcggaggaggatgggtctgtcgtcaaggttacc
accgtttccaaggctgtaaccagcccgtcggtgttcagtcgagtgcggcaggtgcacagg
cagcgggaggcggagggcgacagtcagccggcgggcaacgcttcacccgtcaggggcgag
ctgttcgcctcgccgcagaggagctcccaggcctcgtcgctgggatgcaacagcctcccc
aacagccaaccggagccttcgtcacaggaaacaccggcagcagcgccgccgccgccgcag
catcagcagaaaaccccctcgcccgccgaggggaggcgagcaccacccggggtctccgag
ccccccaccccaaacagtgcagacgtccggcagaaggtggtttctcagaacaccgtcagc
tccagtccgtccaacaagctccgtcagcggaccgtctcccagcagaccagcggcctggat
gcagcggggctgcgctcccccgccggcaggggtgaaccggagtctccgtccttcagaaga
accgcaggcccctcccactgcagacacgtgcgcaccgtccaggaagtgcggacgacggtg
acgcggatcatcacggacgtgtactacgaggacggcaaagaggtggagcgcaaagtcaga
gaggagaacgaggagcccgtggtcgactgccacgtgctggacagcgacatctcgccgtgc
cgcacgggcagcagctccatgacctccggcgacctgggcgacatcagctcgctgtcgtcc
aaggcgtccagcctgcagcacagctcgggggggaccagcagcagcaccggcttcaccagg
cccgacttcctcatgccgtccggccgcggggcccgatccttcagcccccgtaggggaggt
gggcatcaacggaggggtcaccggggtcacagggcggggtcagtgatcacggtgggggac
agaggctacggcgccctggggtcccgcggcttcgtcccgctgactcccaggggaagagcc
agaaggggccggcccccgtcccgctactccctgtccaggggcggcggctcgtttcagaga
atcggcgctcagcaacactcgtcctcggaggacgagcccttcacccgcatgctgcccccc
cgcctccccgccagccccacggacggcgagccgcccagccgctctgactccctccgctcg
tcgccggaggagggggggagcgcggccggccgcagcagcttcgtgggcctgcgcgtcgtg
gccaagtggtcgtccaacggctacttctactcgggccgcatcgtcaaggacgccggcgag
gggagcttccgcctgcgcttcgacgacggatacgagtgcgaggtggaagggaaggacatc
ctgctgtgcgaccccatccccctggagacggaggtcaccgctctgctggaggacgagtac
ttcagcataggtgttgtgcgcggtcacaagaccgagggccaggacctgttctacagtgtg
gagcgggacggccagcagcagtggtacaaccggacctcggtcatcctgtccctggagcag
gggaaccggctgagggagcagcacagcctcgggccctacgagccggccgctccgctggcc
aaggcctccgacatcagtctggacaacctggtggaggggaagaggcggcgccgggtgacc
ctcggcggtcccgacacgcccaaccgcagctcctccagcagccctcgtacccccggcccg
tcgggcaagaggaagctgaggacgacctcagaggacgaccggacgccggccaagcgaggc
cgcaggggtccgggcgccagagccgttcagcgggtcggcgcgtgcaacacctcgggcagc
ggcaccgacctcccgggtccgtctggcgacgcggcggacactcacggcccgctgccccag
aatgcctctctcttcctgggctttgccttcatgctgacggcctcgtcggagagcgaccgg
ctgaccaacctcctcaccgccggcgacgacgacgatgattacgtgcagacgagtccgtac
aacaaagcgtacacggagtcgcagctgcaggcgggcggaggcttcgtcctgccggacttc
aacgaagaacagtgcaaggcggcctatcagagcctgctcatcgctgaccagcactgccgc
accaggaagtacctgcagtgtttggcgagcggcgttccgtgcgtgtcgcacgtctgggtg
cgcgactgctgcaaagagaacaagctgctcaactacaggaactacctgctgccggccggc
gtggggccggacgccgccgttgtggaatggcacccgcgctgcagccccttcaaggccctg
cgggtgctgctggtgttcgaggagccggtggagctctgggcgcagctggtcacgatgggc
ggagcctcctcggtgcgacagttccagggggacaaggacggttcagacattccgacgggc
aagtacgacgtggtggtgacggaccgcgcctgtccgccgttggtggagaagagcgtgacg
tcgcaggacgtcccgctggtgtcccccgagtggatcatcgagagcgtgattggcggcgag
cgcctgggcttccgcagcaagccgcagtatcgccacgactacgcctcgtaa
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integrated database retrieval system
