Scophthalmus maximus (turbot): 118310820
Help
Entry
118310820 CDS
T09850
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118310820
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118310820
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
Gp58
zf-RING_5
zf-RING_10
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
118310820
NCBI-ProteinID:
XP_035490020
EnsemblRapid:
ENSSMAG00025025272
LinkDB
All DBs
Position
5:27252708..27256224
Genome browser
AA seq
569 aa
AA seq
DB search
MMGGNNSRSSMRGEMARKVIQLERKTFSCSICLDLLKDPVTIHCGHSYCMRCIKTHWDIE
DEKKIYSCPQCIQTFRKRHVLVKNIMLADLVEQLKKTALQAAPADHCYAGAEDVACDVCI
GRKRKAVKSCLVCLASYCEKHLQPHYKSLTFEKHKLVDPTKKLQESICSRHDEVMKMFCR
TDQQCICYLCSVEEHKGYDTVSAAAERTERQRELELSRQQIQQRVQDREKDVKLLQQELE
AVNGSADKAVEDSEKIFTKLIRLVEKRSSGVKQQIRSQQETEVSRVKDLREKLEQEITEL
KRKDAELKQLSHTEDHNQFLHNYPSLTPLSPSTHSSSIDIRPLRYFEAVTDAVSEVRGRL
QDVLTESETNISLTVTQVDVLLSQPEPKTREEFLTYSQEITLDPNTANKRLLLSKGNRKV
TRMREQLHSSHPDRFTYWSQVLSKKSLTGRCYWEVKWRGRVDVAVTYKNIIRAGNSDECA
FGCNDKSWALYCLGNSYKFSYNSIDTPVSGPRSSRVGVYLDHSAGVLSFYSVSDTMTLLH
RVQTTFTQPLCAGAGIYRDGSTAEFCKLK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtggaaacaacagtcgttcctcaatgagaggtgaaatggcgcggaaagtaatt
cagctggagcggaaaaccttctcttgttccatctgtctggatctactgaaggatccggtg
actattcactgtggacacagctactgtatgagatgtattaaaacccactgggacatagag
gatgagaagaagatctacagctgccctcagtgtatacagacattcagaaagaggcatgtc
ctggtgaaaaacatcatgttggctgatttagtggagcagctgaagaaaactgcactccaa
gctgctcctgctgatcactgctacgctggagctgaagatgtggcctgtgatgtttgtatt
gggagaaaacggaaagccgtcaaatcctgtttggtttgtttggcctcttattgtgagaaa
cacctccagcctcattataaatccttgacctttgagaagcacaagctggtggaccccacc
aagaagctccaggagagcatctgctctcgtcacgatgaggtgatgaagatgttctgccgc
actgatcagcagtgtatctgttatctctgctctgtggaagaacataaaggctacgacaca
gtctcagctgcagcagaaaggaccgagaggcagagagagctcgagctgagtcgacaacaa
atccagcagagagtccaggacagagagaaagatgtgaagctgcttcaacaggagctggag
gctgtcaatggctctgctgacaaagcagtggaggacagtgagaagatcttcactaagctg
atccgtctggtggagaaaagaagctctggcgtgaagcagcagatcagatcccagcaggaa
actgaagtgagtcgagtcaaagatcttcgggagaagctggagcaggagatcactgagctg
aagaggaaagacgctgaactgaagcagctctcacacacagaggatcacaaccagtttcta
cacaactacccctcattgacaccactcagtccgtctacacactcatccagcatcgacatc
cgtcctctcaggtactttgaggctgtgacagatgctgtgtcagaggtcagaggtcgacta
caggacgtcctgactgagtcagagacaaacatctcactgacagtgactcaagtggatgtt
ttactgtcacaaccagagcccaagaccagagaggaattcttaacatattcacaggaaatc
acactggatccaaacacagcaaacaaacgtctgttattatctaaaggaaacagaaaagta
acaagaatgagagaacagttacattctagtcacccagacagattcacttattggtctcag
gtcctgagtaaaaagagtctgactggacgttgttactgggaggtgaagtggagaggacga
gttgatgtagcagtcacatacaagaatatcatcagagcagggaactcagatgaatgtgca
tttggatgtaatgacaaatcttgggcgttatattgtcttggaaacagttataagttttct
tacaacagtatcgacactccagtctcaggtcctcgatcctccagagtcggagtgtacctg
gatcacagtgcaggtgttctgtccttctacagcgtctctgacaccatgactctcctccac
agagtccagaccacattcactcagccgctctgtgctggagctgggatttatagagatgga
tccacagctgagttctgtaaactaaaatag
DBGET
integrated database retrieval system
