Scophthalmus maximus (turbot): 118310824
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Entry
118310824 CDS
T09850
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118310824
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118310824
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_10
Gp58
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
118310824
NCBI-ProteinID:
XP_035490025
LinkDB
All DBs
Position
5:26644733..26647629
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AA seq
556 aa
AA seq
DB search
MEQKGVELERESFSCSVCLDLLKDPVTIPCGHSYCMSCIKTHWDKEDEKRIYSCPQCRQT
FTLRPVLVKNTMLADLVEQLKKTGLQAAPADHCYAGAEDVACDVCTGKKLKADKSCLVCL
ASYCEKHLQPHYESSAFEKHKLVDPTKKLQENICSRHDEVMKMFCRTDQQCICYLCSVDE
HKGHDTVSAAVERTERQRELELSRQEIQQRVQDREKDVKLLQQELEALNGSADKAVEDSE
KIFTEMIRLVEKRSSDVKQQIRSKQETEVSRVKDLQEKLEQEITELKRKDAELKQLSHTE
DHNQFLHNYPSLTPLSPSTHSSSINIRPLRYFEAVTAAVSEVRGRLQDVLTESETNISLT
VTQVDVLLPQPEPKTREEFLRYSQEITLDPNTAYKCLLLSEGNRKVTVMREEQFYSVHPD
RFTYYWQVLSRESLTGRCYWEVEWRGGVYVAVTYKNIRRAGISGECGFGFNDKSWRLDCY
ENTYNFYYNRIKTPVSGPVSSRVGVYLDHSAGVLSFYSVSDTMTLLHRVQTTFSQPLCAG
VGFYYKGSTAEFCKLK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaaaggagttgagctggagcgggaatccttctcttgttccgtctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgtatgagctgcattaaa
acccactgggacaaagaggatgagaagaggatctacagctgccctcagtgtagacagacc
ttcacactgagacctgtcctggtgaaaaacaccatgttggctgatttagtggagcagctg
aagaagactggacttcaagctgctcctgctgatcactgctacgctggagctgaagatgtg
gcctgtgatgtttgtactgggaaaaaactgaaagctgacaagtcctgtttggtttgtttg
gcctcttattgtgagaaacacctccagcctcattatgaatcctctgcctttgagaagcac
aagctggtggaccccaccaagaagctccaggagaacatctgctctcgtcatgatgaggtg
atgaagatgttctgccgcactgatcagcagtgtatctgttatctctgctctgtggacgaa
cataaaggccacgacacagtctcagctgcagtagaaaggacggagaggcagagagagctc
gagttgagtcgacaagaaatccagcagagagtccaggacagagagaaagatgtgaagctg
cttcaacaggagctggaggctctcaatggctctgctgacaaagcagtggaggacagtgag
aagatcttcactgagatgatccgtctggtggagaaaagaagctctgacgtgaagcagcag
atcagatcgaagcaggaaactgaagtgagtcgagtcaaagatcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgaactgaagcagctctcacacacagag
gatcacaaccagtttctacacaactacccctcactgacaccactcagtccgtctacacac
tcatccagcatcaacatccgtcctctcaggtactttgaggctgtgacagcagctgtgtca
gaggtcagaggtcgactacaggacgtcctgactgagtcagagacaaacatctcactgaca
gtgactcaagtggatgttttactgccacaaccagagcccaagaccagagaggaattctta
agatattcacaggaaatcacactggatccaaacacagcatacaaatgtctgttattatct
gagggaaacagaaaagtaacagtaatgagagaagaacagttttattctgttcacccagac
agattcacttattattggcaggtactgagtagagagagtctgactggacgttgttactgg
gaggtggagtggagaggaggagtttatgtagcagtcacatacaagaatatcagaagagca
gggatctcaggtgaatgtggatttggattcaatgacaaatcttggaggttagattgttat
gaaaacacttataacttttattacaacagaatcaaaactccagtctcaggtccggtgtcc
tccagagtcggagtgtacctggatcacagtgcaggtgttctgtccttctacagcgtctct
gacaccatgactctcctccacagagtccagaccacattctctcagccgctctgtgctgga
gttgggttttattataaaggatccacagctgagttctgtaaactcaaatag
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