Scophthalmus maximus (turbot): 118310826
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Entry
118310826 CDS
T09850
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118310826
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118310826
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
Gp58
U-box
zf-RING_5
zf-RING_10
DDE_Tnp_IS240
Exonuc_VII_L
Sec8_N
DUF4407
Motif
Other DBs
NCBI-GeneID:
118310826
NCBI-ProteinID:
XP_035490027
EnsemblRapid:
ENSSMAG00025024802
LinkDB
All DBs
Position
5:26745500..26748992
Genome browser
AA seq
550 aa
AA seq
DB search
MAQKRVQLERESFSCSICLDLLKDPVTIPCGHSYCMICIKTHWDIQDENRIHSCPQCRQT
FRPRPVLVKNIMFTDLVEHLKKTGLQATPADHCYAGAEDVACDVCTGRKLKAVKSCMVCL
ISYCEKHLQHHYDVPQLKKHKLVDPMKKLKGNICSRHDEVMKMFCRTDQQCICYLCSVDE
HKGHDTVSAAAERTERQKELELSRQQILQRVQDREKDVKLLQQELEAVNGSADKAVEDSE
KIFTELIRSLKMQIRSQKETEVSRVKDLQEKLEQEITELKRKDAELKQLSHTEDHNQFLH
NYPSLTPLSPSTHSSSINIRPLRYFEAVTAAVSEVRGRLQDVLTESETNISLTVTQVDVS
LSQPEPKTREEFLTFSQEITLDPSTVNKHLLLSEGNRKVTRMREEQFYSSHPDRFTDYYQ
VMSRESLTGRCYWEVEWKGAVYVAVAFKNISRAGKSRECAFGWNDKSWALNCHRNSYNFY
YNSINTPVSGPRSSRVGVYLDHSAGVLSFYSISHTMTLLHRVQTTFTQPLCAGVRIYYDE
GDTAEYCKLK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcccagaaaagagttcagctggagcgggaatccttctcttgttccatctgtctagat
ctactgaaggatccggtgactattccgtgtggacacagctactgtatgatctgtattaaa
acccactgggacatacaggatgagaacagaatccacagctgccctcagtgtagacagacc
ttcagaccgaggcctgtcctggtgaaaaacatcatgttcactgatttagtggagcatctg
aagaagactggactccaagctactcctgctgatcactgctacgctggagctgaagatgtg
gcctgtgatgtttgtactgggagaaaactgaaagccgtcaagtcctgtatggtttgtttg
atctcttattgtgaaaaacacctccagcatcattacgatgtacctcagctaaagaagcac
aagctggtggaccccatgaagaagctcaaggggaacatctgctctcgtcatgatgaagtg
atgaagatgttctgccgcaccgatcagcagtgtatctgttatctctgctctgtggacgaa
cataaaggccacgacacagtctcagctgcagcagaaaggaccgagaggcagaaagagctc
gagctgagtcgacaacaaatcctgcagagagtccaggacagagagaaagatgtgaagctg
cttcaacaggagctggaggctgtcaatggctctgcagataaagcagtggaggacagtgag
aagatcttcaccgagctgatcagatcactgaagatgcagatcagatcccagaaggaaact
gaagtgagtcgagtcaaagatcttcaggagaagctggagcaggagatcactgagctgaag
agaaaagacgctgaactgaagcagctctcacacacagaggatcacaaccagtttctacac
aactacccctcactgacaccactcagtccgtctacacactcatccagcatcaacatccgt
cctctcaggtactttgaggctgtgacagcagctgtgtcagaggtcagaggtcgactacag
gacgtcctcactgagtcagagacaaacatctcactgacagtgactcaagtggatgtttca
ctgtcacaaccagagcccaagaccagagaggaattcttaacattttcacaggaaatcaca
ctggatccaagcacagtaaacaaacatctgttattatctgagggaaacagaaaagtaaca
agaatgagagaagaacagttttattctagtcacccagacagattcactgattattatcag
gtcatgagtagagagagtctgactggacgttgttactgggaggtggagtggaaaggagca
gtttatgtagcagtcgcattcaagaatatcagcagagcagggaagtcacgtgaatgtgca
tttggatggaatgacaaatcttgggcgttaaattgtcacagaaacagttataacttttat
tacaacagcatcaacactccagtctcaggtcctcggtcctccagagtcggagtgtacctg
gatcacagtgcaggtgttctgtccttctacagcatctctcacaccatgactctcctccac
agagtccagaccacattcactcagccgctctgtgctggagttaggatttattatgatgaa
ggagacacagctgagtactgtaaactcaaatag
DBGET
integrated database retrieval system
