Scophthalmus maximus (turbot): 118310828
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Entry
118310828 CDS
T09850
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118310828
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118310828
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
SPRY
zf-RING_2
zf-RING_5
U-box
zf-RING_6
Gp58
SseC
Perilipin
Motif
Other DBs
NCBI-GeneID:
118310828
NCBI-ProteinID:
XP_047188218
EnsemblRapid:
ENSSMAG00025024849
LinkDB
All DBs
Position
5:26955289..26957725
Genome browser
AA seq
548 aa
AA seq
DB search
MAQKQVELKRESFSCSICLDLLKHPVAIPCGHSYCMRCIKTHWDIEDEKRIYSCPQCRQT
FRKRHVLVKNTMLADLVEQLKKTGLQAAPADHCYARPEDVACDVCTGRKLKAVKSCLVCL
VSYCEKDLQPHYDVPQLKKHKLVDPTKKLQENICSRHDEVMKMFCRTDQQCICYLCSVDE
HKGHDTVSAAVERTERQRELELSRQQIQQRVQDREKDVKLLQQELEAVNGSADKAVEDSE
KIFTEMIRLVEKRSSDVKQQIRSQQETVVSPVKDLQEKLEQEITELKRKDAELKQLSHTE
DHNQFLHNYPSLTPLSPSTHSSSINIRPLRYFEAVTAAVSEVRGRLQDFLTETWTNISLT
VTQEPKTREEFLRYSQEITLDPNTANTHLFLSEGNRKVTVMREEQFYSSHPDRFTGYCQV
LSRESLTGRCYWEVERRGRVYVAFTYKNISRAGRSSECVFGCNDKSWMLSCLGNSYNFYY
NSIKTPLSGPVSSRVGVYLDHSAGVLSFYSVSDTMTLLHRVQTTFTQPLCAGIRIYDYGS
TAEFCKLK
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaacaagttgagctgaagcgggaatccttctcttgttccatctgtctggat
ctactgaagcatccggtggctattccctgtggacacagctactgtatgagatgtattaaa
acccactgggacatagaggatgagaagaggatctacagctgccctcagtgtagacagaca
ttcagaaagaggcatgtcctggtgaaaaacaccatgttggctgatttagtggagcagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctcgacctgaagatgtg
gcctgtgatgtttgtactgggagaaaactgaaagccgtcaagtcctgtttggtttgtttg
gtctcttattgtgagaaagacctccagcctcattacgatgtacctcagttaaagaagcac
aagctggtggaccccaccaagaagctccaggaaaacatctgctctcgtcacgatgaggtg
atgaagatgttctgccgcaccgatcagcagtgtatctgttatctctgctctgtggacgaa
cataaaggccacgacacagtctcagctgcagtagaaaggaccgagaggcagagagagctc
gagctgagtcgacaacaaatccagcagagagtccaggacagagagaaagatgtgaagctg
cttcaacaggagctggaggctgtcaatggctctgctgacaaagcagtggaggacagtgag
aagatcttcactgagatgatccgtctggtggagaaaagaagctctgacgtgaagcagcag
atcagatcccagcaggaaaccgtagtgagtccagtcaaagatcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgaactgaagcagctctcacacacagag
gatcacaaccagtttctacacaactacccctcactgacaccactcagtccgtctacacac
tcatccagcatcaacatccgtcctctcaggtactttgaggctgtgacagcagctgtgtca
gaggtcagaggtcgactacaggacttcctgactgagacatggacaaacatctcactgaca
gtgactcaagagcccaagaccagagaggaattcttaagatattcacaggaaatcacactg
gatccaaacacagcaaacacacatctgtttttatctgagggaaacagaaaagtaacagta
atgagagaagaacagttttattctagtcacccagacagattcactggttattgtcaggtc
ctgagtagagagagtctgactggacgttgttactgggaggtggagaggagaggaagagtt
tatgtcgcattcacatacaagaatatcagcagagcagggaggtcaagcgaatgtgtattt
ggatgcaatgacaaatcttggatgttaagttgtcttggaaacagttataacttttattac
aacagtatcaaaactccactctcaggtccggtgtcctccagagtcggagtgtacctggat
cacagtgcaggtgttctgtccttctacagcgtctctgacaccatgactctcctccacaga
gtccagaccacattcactcagccgctctgtgctgggataaggatttatgattatggatcc
acagctgagttctgtaaactcaaatag
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