Scophthalmus maximus (turbot): 118310887
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Entry
118310887 CDS
T09850
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118310887
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118310887
BRITE hierarchy
Motif
Pfam:
zf-C3HC4_4
PRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
SPRY
zf-RING_2
U-box
zf-RING_5
zf-RING_10
CC149
CCDC53
Gp58
SPAM
Motif
Other DBs
NCBI-GeneID:
118310887
NCBI-ProteinID:
XP_035490113
EnsemblRapid:
ENSSMAG00025025285
LinkDB
All DBs
Position
5:complement(26378047..26380726)
Genome browser
AA seq
556 aa
AA seq
DB search
MAQKGVELERESFSCSICLDLLKDPVTIPCGHSYCMSCIKTHWDKEDEKRIYSCPQCRQT
FTLRPVLGKNTMLADLVEQLKKTGLQAAPADHCYAGAEDVACDFCTGRKLRAVKSCLVCL
ASYCEKHLQHHYDAAPLKKHKLVDPTNKLQENICSRHDEVMKMFCRTDQQCICYLCSVDE
HKGHDTISAAAERTERQRELELSRQQIQQRVQDIEKDVKLLQQELEAVNGSADKAVEDSE
KIFTEMIRLVEKRSSDVKQQMRSQQETEVSRVKDLQEKLEQEITELKRKDAELKQLSHTE
DHNQFLHNYPSLTPLSPSTHSSSINIRPLRYFEAVTAAVSEVRGRLQDVLTESETNISRT
VTQVDVSLSQPEPKTREEFLRYSQEITLDPNTVNTLLLLSGGKRKVTGMRNEQFYSSHPD
RFTYWSQVLSRESLTGCCYWEVEWRGIVNVAVAYKNIIRAGISDECRFGLNDKSWALYCY
ENTYNFYYNSIKTPVSGPWSSRVGVYLDHSAGVLSFYSVSDTMTLLHRVQTTFTQPLYAG
VGIIFYESTAEFCKLK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttgagctggagcgggaatccttctcttgttccatctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgtatgagctgtattaaa
acccactgggacaaagaggatgagaagaggatctacagctgccctcagtgtagacagacc
ttcacactgaggcctgtcctggggaaaaacaccatgttggctgatttagtggagcagctg
aagaagactggactccaagctgctcctgctgatcactgctacgctggagctgaagatgtg
gcctgtgatttctgcactgggagaaaactgagagccgtcaagtcctgtttggtttgtttg
gcctcttattgtgaaaaacacctccaacatcattatgatgcagctccgttaaagaagcac
aagctggtggaccccaccaacaagctccaggagaacatctgctctcgtcacgatgaggtg
atgaagatgttctgccgcaccgatcagcagtgtatctgttatctctgctctgtggacgaa
cataaaggccacgacacaatctcagctgcagcagaaaggacggagaggcagagagagctc
gagctgagtagacaacaaatccagcagagagtccaggacatagagaaagatgtgaagctg
cttcaacaggagctggaggctgtcaatggctctgctgacaaagcagtggaggacagtgag
aagatcttcactgagatgatccgtctggtggagaaaagaagctctgacgtgaagcagcag
atgagatcccagcaggaaactgaagtgagtcgagtcaaagatcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgaactgaagcagctctcacacacagag
gatcacaaccagtttctacacaactacccctcactgacaccactcagtccgtctacacac
tcatccagcatcaacatccgtcctctcaggtactttgaggctgtgacagcagctgtgtca
gaggtcagaggtcgactacaggacgtcctgactgagtcagagacaaacatctcacggaca
gtgactcaagtggatgtttcactgtcacaaccagagcccaagaccagagaggaattctta
agatattcacaggaaatcacactggatccaaacacagtaaacacacttctgttattatct
gggggaaaaagaaaagtgacaggaatgagaaacgaacagttttattctagtcacccagac
agattcacttattggtctcaggtcctgagtagagagagtctgactggatgttgttactgg
gaggtggagtggagaggaatagttaatgtagcagtcgcatacaagaatatcatcagagca
gggatctcagatgaatgtagatttggattaaatgataaatcttgggcgttatattgttat
gaaaacacttataacttttattacaacagtatcaaaactccagtctcaggtccttggtcc
tccagagtcggagtgtacctggatcacagtgcaggtgttctgtccttctacagcgtctct
gacaccatgactctcctccacagagtccagaccacattcactcagccgctttatgctgga
gttgggattattttctatgaatccacagctgagttctgtaaactaaaatag
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