Scophthalmus maximus (turbot): 118311649
Help
Entry
118311649 CDS
T09850
Name
(RefSeq) macrophage mannose receptor 1 isoform X1
KO
K06560
mannose receptor, C type
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118311649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118311649
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
smau04054
]
118311649
04090 CD molecules [BR:
smau04090
]
118311649
04091 Lectins [BR:
smau04091
]
118311649
Membrane trafficking [BR:
smau04131
]
Endocytosis
Phagocytosis
C-lectin receptors
118311649
Pattern recognition receptors [BR:
smau04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
118311649
CD molecules [BR:
smau04090
]
Proteins
118311649
Lectins [BR:
smau04091
]
C-Type lectins
Group 6: Mannose receptor family
118311649
BRITE hierarchy
Motif
Pfam:
Lectin_C
fn2
Ricin_B_lectin
Motif
Other DBs
NCBI-GeneID:
118311649
NCBI-ProteinID:
XP_035491558
EnsemblRapid:
ENSSMAG00025021191
LinkDB
All DBs
Position
5:complement(21312803..21328409)
Genome browser
AA seq
1439 aa
AA seq
DB search
MSAAVRLIRGRMLTLRITLAAFLLFILTSQCSTANGTVLTQDFLDAQFSLTNKATGFCLL
KKFNRCLDIRWTTGNRLFAVASKKCLGAQGKTVGSEVNLYDCDDKTDLQKWECRNNTLLA
LKGKELYIGVKADESIALTKTVGPNNHLTITGTTSGACTRTYRELYTIGGNSFGKICTFP
FFYKDRWFGDCTTFDSSQKRLWCAVETKYEHELWGYCPTTSRDHWTKYLVTGTYYQINTQ
SALTWPQAEVSCKQQGATLVSIYEPNEQAFIAALLGEGKYKLWIGVVLDPEHGWQWSNGK
PFRYLRWSTGNPLPNPGHNCAFLDTAEQHSWQSSSCMKKLGYICYKDMVTPTPTLTEQGF
CSSPWIPYNGHCFHLQRSLQTWSNAQIECRKERGDLVSIRNVEDQSFVISQLGYASSDEL
WIGLNDRRTEGFFDWSDYSAVSFTSWEYGKPAVSTDGEDCVLIKGEKGNWADRSCDEKHG
FICMKQSDTERTGEEVDLDIGCKAGWKRHGSYCYFVGSETKTFDEAKDECKSSDSYLADV
SNGVDNAFLVSLVGLRPEKYFWLGLSNQKNIDEFVWTNTDSVRFTHWNTEMPGYREGCVA
MTTGVLAGLWDLLPCTNQEKYICKHLAEGAVLTVPPPTQIPPKCADGWTRSGTRNICSKF
FTGPRSDEKTWYEARDYCRAIGGDLLSIHSSAELLVGRYGKAWIGLHVPDPSTGYAWSDG
SPLNFQHWQEGEPNNFNNAESCAEFRINSWDESGSWNDVNCETYNDWLCQIRAGVIPKLP
PNATAVDYNTTSDGWLEWRGNQYYINRVAMPMEDARNFCQKKHGDLVSISSKDENNFLWK
QISRSYGQYYIGLSVDLDGSFWWMDGTSVGLQRWEENQPNTNTFDENCVTMTYYMGFWRT
RNCGQDNQSFCKRAHSTPANTTAAPTVPPKGGCPLKWKQFDSKCYSINSVRRTTWEESRS
QCITIGGNLVSVPTRRVQAFLTTLLAAVGTDVWIGLNSIKQDGFYWTDGKPRRYTNWGYS
KQQRIPGNFYQRWNEEDCVVMNSNPSLGTGKWLIRSCNDTKGFVCHRNLDPNSVAQPTIV
HNYYVTLGNDSIKALTQNLTWDNAKKHCEGDKANLVSLRNEWTQAYVELLAMNLKSPLWI
GLNKQQTGGYFRYIDGWQMNIANWAEGEPSSDLPCVYMDVEGKWRTALCNQTMNSVCMQS
TDVPPTESTTFPGICPDETSSEYHQSFSWLPFKGHCYLFITEEVEWANAASSCVRHGGIL
TSIEDPSEQQFLRSNLEIFQNSHTSFWIGLYKTHKGTWMWLDRTVLDYTNWAADEPDSDF
GNIATQDGTWQSGHRWHDRPFICKTPKVIFQDSDIKPEPHGGQDPRSRAHTTLVVVVIIA
FVSSLIAIQVFLYKKFPRLIPTFENPLYFNSERSQPDVVDTNKLIENAEEEIPEPIIAL
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgctgtgagacttatcagaggaagaatgctgacccttaggataactctagca
gcctttttactcttcatcctaacatctcaatgttcaacagcaaatggtacagtattaact
caagatttcttagatgcccaattctcactcaccaacaaggccacggggttttgtttgctg
aaaaaattcaaccgctgccttgacatccgctggacgacgggtaatcggcttttcgctgtc
gcatccaaaaagtgcctgggggcgcagggcaaaactgtggggagtgaagtgaacctctac
gactgtgatgacaagactgacctccagaagtgggaatgcaggaacaacacgctgctcgcc
ctcaaaggcaaagagctctacattggagtcaaagctgatgaatcaattgctctcaccaaa
acggttgggccaaataaccacctcacaatcactgggacaaccagcggtgcttgcacaaga
acatacagagaattgtacaccattggaggaaattcatttggtaagatctgcacatttccc
ttcttctacaaagaccgctggtttggagattgcaccacgttcgactcctcacaaaagcgt
ctctggtgtgcagtggagacaaaatatgaacacgaactgtggggatactgcccgactact
tccagagatcactggacgaaatacctcgtaacaggaacatattaccaaatcaacacacag
tcagctctgacatggcctcaggccgaagtcagctgcaaacagcagggcgccaccctggtc
agtatctacgaaccaaatgagcaggctttcatcgcagcactactaggagaggggaaatat
aaactttggattggagtggttctggacccagaacatggctggcagtggagtaatgggaag
cctttccgttacttgagatggagtactggaaacccacttcctaatccaggacacaactgt
gcatttcttgacactgccgagcagcattcttggcaaagttcctcctgcatgaagaaactg
ggctacatctgctacaaagacatggtcacaccaactccaacactaactgagcaagggttt
tgttcaagcccatggattccctacaatggccactgcttccacctgcagcgttctcttcaa
acatggtctaatgctcagatagagtgccgcaaagagcgaggagacctagtgagcattcgc
aatgtggaggaccaaagctttgtcatctctcaacttggatacgcatccagtgatgagctt
tggattggactaaatgacaggaggacagaggggtttttcgactggagtgactattctgct
gtcagcttcaccagctgggagtatgggaaacctgctgtgtccactgatggagaagactgt
gttctcatcaagggggagaaggggaactgggcggatcgctcgtgtgatgagaaacacggc
tttatctgtatgaagcagagtgacactgaacgcactggagaagaagtggatctggacata
ggctgcaaagcgggttggaaaagacatggttcctactgctactttgtaggaagtgagaca
aagacttttgatgaagccaaagatgaatgcaagagctcagactcctacttagctgatgtt
tcaaatggggtggacaacgccttccttgtcagcttggtggggttgagaccagagaaatac
ttctggttagggctgtcaaaccagaaaaacattgatgaatttgtgtggaccaacacagac
tcagtgaggttcactcactggaacactgagatgccaggttacagagagggttgtgttgcc
atgacaactggggttttggccggactttgggatctgctgccctgcaccaaccaggagaaa
tacatctgcaaacacctggcagagggggcagttttaaccgtcccaccaccgactcaaatt
cctcctaagtgtgcagacggttggactcgatcaggaacaagaaacatctgctctaagttt
tttacagggccccgttcagatgagaagacctggtatgaggcaagggattactgcagggcc
attggaggagatctgctcagcatccacagctctgctgaactattagtgggacgttatgga
aaagcctggattggacttcatgttcctgatccaagtactggttatgcatggagcgatgga
tccccattaaacttccagcactggcaggaaggagagccaaacaattttaacaatgcggaa
tcttgtgctgaattcagaataaatagctgggatgaatccgggtcttggaacgatgtgaac
tgtgagacttacaatgactggctgtgtcagatccgtgcaggagtgattccaaaactccct
ccaaatgccacagcagtggactacaataccacttcagatggttggcttgagtggagagga
aatcagtattacattaacagagtggcaatgcccatggaagatgctcgtaatttctgtcag
aagaagcatggtgacttggtatctatcagcagtaaagatgaaaataacttcttatggaaa
cagatttctagaagctatgggcaatattatataggtttgtctgtggatcttgacgggtca
ttttggtggatggatggtacttcagtgggactgcaaagatgggaagaaaatcaaccgaat
acaaatacctttgatgagaactgtgttactatgacttattatatgggcttctggcgcaca
cgtaactgtggccaagataaccagtccttttgtaaacgagcacactcaacacctgccaac
accactgcagcccccacagttccccctaaaggtggctgcccactcaagtggaagcaattt
gactcaaagtgttacagtatcaacagtgtccggaggaccacctgggaagaatcaaggagt
cagtgcattaccattggaggaaatttagtctcagttccgacaagacgtgtgcaagcattt
ctaaccaccttactggcagcagtaggaacagacgtgtggataggtttgaatagtataaaa
caagatggtttttactggactgatggaaagccaaggcgatataccaactggggatattct
aaacaacagcgtattcctgggaacttttatcaaagatggaatgaggaagactgtgttgtg
atgaacagcaatccttcccttggcactggtaaatggttgattaggtcttgcaatgacacc
aagggatttgtctgtcatcgaaatcttgacccaaattccgtagctcaaccaacaatagtt
cacaattactacgtaactctaggaaatgacagcatcaaggctttgactcaaaatctgacc
tgggacaatgccaagaaacactgtgaaggtgataaagccaacctggtgagcctacgaaat
gaatggacacaggcctatgttgagctgctggctatgaatctcaaatctcccctgtggatt
ggactgaacaagcagcagactgggggttattttaggtatattgatggctggcagatgaac
attgccaattgggctgaaggagaaccaagcagtgacctaccttgcgtgtacatggatgtg
gaaggaaaatggaggactgctctctgcaatcagaccatgaacagtgtttgtatgcagtct
acagatgtgccaccaacagagtcaaccactttcccaggaatttgccctgatgagacaagt
tcagagtaccaccagagtttttcttggctgccatttaagggccattgttatttgtttatc
acggaggaagttgaatgggcaaatgcagctagcagctgtgtacggcatggcggtatcttg
actagcatagaagatccttctgagcaacaattcctcagaagcaacttggaaatatttcaa
aatagccacacatcattctggatcggactgtataaaactcataaagggacatggatgtgg
ttggatagaacagtcttagactacactaactgggctgcagatgagcccgattctgacttt
ggaaatatcgcaacccaagatgggacttggcagtcaggacacagatggcacgatagacca
ttcatctgtaaaactcctaaagtgattttccaagattcagatattaaacctgaacctcat
ggaggtcaggatcctcgcagtcgcgcccacacaacgttggttgttgtagtgatcattgct
ttcgtgtcttcgctgatagcaattcaagtcttcctctacaagaagtttcctcgtctcata
cccacctttgaaaatccactatacttcaacagtgaacgatctcagccagatgtagtggac
accaataaactgatagagaatgcagaggaagaaatccctgagcctattatagctctgtga
DBGET
integrated database retrieval system
