Scophthalmus maximus (turbot): 118314257
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Entry
118314257 CDS
T09850
Symbol
npc1l1
Name
(RefSeq) NPC1-like intracellular cholesterol transporter 1
KO
K14461
Niemann-Pick C1-like protein 1
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smau02000
]
118314257 (npc1l1)
Transporters [BR:
smau02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
118314257 (npc1l1)
BRITE hierarchy
Motif
Pfam:
Patched
NPC1_N
Sterol-sensing
MMPL
Folate_rec
Motif
Other DBs
NCBI-GeneID:
118314257
NCBI-ProteinID:
XP_035496469
EnsemblRapid:
ENSSMAG00025020176
LinkDB
All DBs
Position
19:18236002..18246656
Genome browser
AA seq
1357 aa
AA seq
DB search
MVHLTALLVVLTCMVLSQAQHEPGYCAFYEECGRNPLIEGSLIPPIVPCLNYSRARQLTG
QHYRKLKQVCPILDHGENNTRACCSLKQLSSLEMSLTLSKAVLIRCPTCAENFAHLHCIN
TCSPNQSQTVKITKVMNITQLGETKEVVVGYQAFLSTTFADGAFQSCQNVRIPATGGLAI
ATMCGRYGAKLCNPQRWYDFQGDSSNGLAPLDIDFRLVKEGDTEGLPKGVIPYNGRALMC
NETTPSGGQVCSCQDCQESCPSVSHPPPPPGPFRLLGTDGFLVISLILLCLLLFAFVLYI
SVSCLAKSQKREDEKKGKRKGRGKDQNSNDVTQRLIDPSEVTCAERNSMAAQAFLSLEFR
NWGTFMATYPLTVLLLSAAVVAVFAAGLKSIELITDPVELWSAPDSRARQEKDFHDTHFD
PFFRTNQLILTAPDRKGHIYDSLLFGLQNFSGIVSKDLIIELLELQKRIQNIEFWSDDLN
RTASLKDVCFAPLSPNNVSLTDCAVNSLPQYFQNSIDNINAKVNMTELGVTKEVDWRDHL
IYCLNSPLSFKDITDLGLSCMADYGAPVFSFLAVGGYENDDFTNAEALIMTFSLNNYARN
NPKFEVAMQWEKEFLKIVQDYQKSPANNFTFAYMAERSLEDEINRTTAEDIPIFMISYAV
IFVYIAVALGEYSSWKRILVDSKFLVGLGGILVVGCSVLASMGFYSWIGIPSSLVVLQVV
PFLVLAVGADNIFIFVLEFQRDVRRPGEKREEQIGRVLGNVAPSMLLCSLSESVCFFLGA
LSTMPAVKTFALYAALAVLMDFILQMTAFVALLSLDARRQDNNRCELLCCVTVSAQHPKK
PNEGFLLPLMRKYYAPVLLHRYTRILVMFVFIFMLCGSVFLMFNVTVGLDQELAMPQGSY
MLDYFKYLYKYFEVGVPVYFVTKRGFNFTTVEGMNAVCSSVGCDQFSLTQKIQYATNYPD
QSYIAIPANSWVDDFIDWLNPGSKCCRLYNANINNGTFCPASELAQRCRRKCMVAPPDGV
LRPNVTQFDRYLPDFLGNRPDLQCPKGGLGAYDKAVVKDASGEIIASRFMAYHTPLTNSQ
EFTAALLKSRELAHNITMGMRQIPGTSPDFEVFPYTLTNVFYEQYLTVVPEGLFNISLCL
LPTFVVCCLLLGLDLRSGLLNLITIIMIVVDTVGVMTLWDIDYNAVALINLVTAVGISVE
FVSHMTRSFALSTKPSHVERAMEATANMGSAVFAGVAMTNLPGILVLAFAKAQLIQIFFF
RLNLVITLLGLAHGLIFLPVLLSYFGPGVNKAVLLQLQQAKAKASQELETRTNTRQVYDN
LSYEDNEIKLDPDSEKAVTDASGPSTIKEKVERIDRF
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggtccacctaacagcgctgttagttgttctgacttgtatggtgctgtcgcaggcccaa
catgagcccggctactgcgctttctatgaggagtgtggacgtaacccattgatagaggga
tccctcattcctcccattgtcccctgtctaaactacagccgtgcccggcagctcacagga
cagcactacaggaaactcaaacaggtgtgtcccattctggaccatggtgagaacaacacg
cgcgcctgctgctccctcaaacagctctcatccctggaaatgagtctgaccctgtccaag
gccgtgctgatccggtgccccacttgcgctgagaactttgcccacctgcactgcatcaac
acctgcagccccaaccagagccagacggtgaagatcacaaaggtcatgaacatcactcag
ctcggcgagacgaaggaggtcgtggttggttaccaggcattcctcagcaccacatttgca
gacggcgccttccaatcttgtcaaaatgtcaggatacccgccacaggaggcctcgccatt
gccaccatgtgtggccgctacggcgccaagctgtgcaacccccagcgctggtatgacttc
caaggagactccagtaacggcctggctccattggacatcgacttcaggctggtgaaagag
ggagacaccgagggactaccaaaaggagtgattccctataatggacgcgcgctaatgtgt
aacgagaccacaccatccggaggtcaagtctgctcctgccaagactgccaagagtcctgc
ccgagtgtgtctcacccaccaccacctcctggtcccttcagactgctggggacagacggc
ttcctcgtgatttctctcatcttactctgtctcctgctatttgccttcgtgctttatatc
tctgtctcttgcttggcgaagtctcagaagcgagaggacgaaaagaaaggaaagagaaaa
gggagaggcaaagaccaaaacagcaatgatgtgactcagcgactcattgacccgtcagag
gtgacgtgcgctgagaggaacagcatggcggctcaagctttcctgagcctggagtttcgg
aactggggcaccttcatggccacttaccccctcacagtgctcctgctgtcggctgcagtc
gtggctgttttcgctgctggactcaaatccattgagctcatcactgacccagtggagctg
tggtctgctcccgacagccgtgcccgccaggagaaagacttccatgacacgcactttgac
cccttcttcaggacgaaccagctgatcttgacagcgccagacagaaaaggccacatttat
gattccttgctgtttggactgcagaactttagcggaattgtatccaaggatctcatcatt
gagctgctggagctccagaaacgaatacagaacatcgagttctggtcagatgatctgaac
cgcactgccagtctgaaggacgtgtgcttcgcaccgttgagcccaaacaacgtctccctg
acggactgtgcggtcaacagtttgccgcagtacttccagaacagcatcgacaacattaac
gctaaggtgaacatgacagagctgggagtgaccaaggaggtggactggagagaccatttg
atctactgcctcaactctcccctgtccttcaaagacatcactgatttaggtttgagctgc
atggctgactatggagcgccagtcttctcctttctggcagtggggggctatgagaatgac
gacttcaccaatgccgaggctttgatcatgaccttctccctcaacaactatgctcgcaac
aaccccaagtttgaagtggccatgcagtgggagaaagagtttcttaaaattgtccaagac
taccagaagagccccgccaacaacttcacatttgcatacatggcagagagatctctggag
gatgaaataaatcggacaacagcggaggacatccccatcttcatgatcagctatgctgta
atctttgtttacattgctgttgcactgggggagtactcgtcgtggaaacgcatactggtg
gactccaagttcctggtgggtctgggtgggatcctggtggtgggctgttctgtcctggct
tccatgggcttctactcctggatcggcatcccctcgtcgctggtcgttctgcaggtcgtg
cccttcctggtgctcgctgtaggagctgacaacatcttcatctttgttctggagttccag
agagatgtgcggaggcccggggagaaaagagaggagcagattggtcgcgtccttggaaac
gtagctcccagcatgctcctgtgcagtctgtctgagtccgtctgtttcttccttggggcc
ctctccaccatgccagcagtcaagacctttgctctgtatgctgctctggctgtgctcatg
gacttcatcctccagatgacggcctttgtggcgctgctgtcccttgatgcccggcgccaa
gacaacaaccgctgtgaactactgtgctgtgtcaccgtgtcagcccagcatcctaaaaag
ccgaacgagggctttctgcttcccctaatgaggaaatactacgccccggtcctactgcat
cgttacaccaggatcttagtgatgtttgttttcatcttcatgctctgtggatccgtattc
ctcatgtttaatgtcacggttggtctggatcaggaactggctatgcctcagggctcgtac
atgttggactatttcaagtacctctacaaatactttgaagtcggagtccctgtttacttt
gtgacaaaacggggcttcaacttcaccactgtggagggcatgaatgcagtctgctccagc
gtgggctgtgatcaattctcactgacccagaagattcagtacgccaccaactaccccgat
caatcctacattgctattcctgctaactcttgggtagatgacttcattgactggctgaac
cctggatccaaatgctgtcgtctgtacaacgccaatataaacaatggaacgttctgtcct
gcaagtgaacttgctcaacgttgtcggcgtaaatgtatggtcgctcctccagatggcgtc
ttaagacccaatgtgacacagtttgaccgttacctccctgacttcctgggcaacaggcct
gacctgcagtgccccaaaggtggtctaggagcctatgacaaagccgtggtgaaagatgcg
agtggagaaattatagcctctcggttcatggcttaccacacgcctttaacgaactctcag
gagttcaccgctgcgctgctgaagtccagagagctggcacacaacatcaccatgggcatg
aggcaaataccgggcacctcacctgactttgaagtatttccgtacacgctcactaatgtg
ttttacgagcagtacttgactgttgtgccagagggactcttcaacatctccctgtgtctg
ctgcccacattcgtggtgtgctgccttctgctggggcttgacctccgctccggccttctc
aacctgattaccatcatcatgatcgtcgtggatactgttggcgtcatgacactgtgggac
atcgactacaacgcagtggccctgatcaatctggtcacggcggtgggcatctctgttgag
tttgtgtcacatatgacaagatcctttgcactaagcaccaagccctcacacgtggaaaga
gctatggaggctacagctaacatgggcagtgcggtgtttgctggtgttgccatgaccaac
cttcctggcatccttgtgcttgcgtttgccaaagcgcagctcatccagatcttcttcttc
cggttaaacctggtcatcactctgctggggttggcccacggactcatattcctccctgtg
ctgctcagttactttggtcctggtgtgaataaggcggtgctgctgcagctccagcaggcc
aaagcaaaggccagccaggagctggagacgaggaccaacacgagacaagtctatgacaac
ctgagctatgaggacaatgagataaaactggacccagactccgaaaaggctgtcacagac
gcaagcggaccttcaacaattaaagaaaaagtggagagaattgaccgtttttga
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