Scophthalmus maximus (turbot): 118316892
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Entry
118316892 CDS
T09850
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03250
Viral life cycle - HIV-1
smau04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118316892 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
118316892 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smau03400
]
118316892 (samhd1)
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
118316892 (samhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
HD
PDEase_I
Motif
Other DBs
NCBI-GeneID:
118316892
NCBI-ProteinID:
XP_035501047
EnsemblRapid:
ENSSMAG00025025612
LinkDB
All DBs
Position
3:9363128..9372070
Genome browser
AA seq
611 aa
AA seq
DB search
MDKRKRPSAAVSSPGDGFDTPERRAPADRAPDSDYSRWGEEETCQYLRREGLGEWEETFR
AQRITGVGLRSLTDADLAELGVEHKGDRLHILHSVCKLWQIGAEPSKVFNDPIHGHVELH
PLLIKIIDTPQFQRLRNLKQLGGSYFVFPGASHNRFEHSIGVCYLAGQLVQALNERQPEL
LITRRDILCVQIAGLCHDLGHGPFSHMFDGRFIPKARPDITWKHENASVAMFDHLVKEND
LNQLMTQHGLVLPEDLTFIKEQIGGPLDTNAAQAKKWQYKGRPNDKSFLYQIVANKTNGI
DVDKWDYFARDCYHLGIQNNFDYRRFLKFARVCEVDGQKHICTRDKEVGNLYDMFHTRNC
LHRRAYQHKVGNIIEAMITEAFLKADPYIQIEGSEGKMFTLSTAIDDMVAYTKLTDNVFE
QILHSSVTELAEPREILNNIICRRLFKFLGETQADERLSVTKEMIKSWEAELAEANPQCE
AQDVNLLPEDFVVSIINMDYGMKEKNPINSVHFYSKDNPTKAYQIRKNQVSKLLPEQFAE
QLIRVYFKKRDDNSLDAAKMHFVQWCMDRNFSKPQDGDIIAPELTPLKASWSNINEREDG
PKKARTQLNFE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggacaagcgaaaacgcccgtcagcggccgtttcgagccccggcgacggcttcgacacg
ccggagaggcgagcgccagcggaccgcgcgccggactcggactactcgcgctggggagag
gaggaaacgtgccagtacctgcgaagagaaggtctcggagaatgggaggaaaccttcaga
gctcaacgcataaccggtgtcggcctcaggtcgctgacggatgcggacctggcggagctc
ggcgtagagcacaaaggtgaccgtctgcacatcctgcacagtgtctgcaagctgtggcag
ataggagcagagccaagcaaggtgttcaacgatcccatccacgggcacgtggagctgcac
ccactcctcatcaaaatcatcgacacacctcagttccagcgactgcgaaacctcaagcag
ctcggagggtcctactttgttttccccggcgcgtcgcacaaccgctttgaacactccatt
ggggtgtgctacttggcaggacagcttgtacaagctctcaatgagcggcagccggagctc
ctcatcacccgcagagacatcctctgtgtgcagatcgcaggactctgccatgacctggga
catgggccattttcccatatgtttgatgggagattcatcccaaaagcacgtccagatatc
acctggaagcatgagaacgcctctgtggccatgtttgatcacctggttaaagaaaatgac
ctgaatcagctgatgacgcagcacggcttggtgctgcctgaggacctgacgtttattaag
gagcagattggtggaccactggacactaatgcagctcaggccaagaagtggcagtataaa
ggacgtcctaacgacaagtcctttctctatcaaatcgtggccaacaaaacaaatggtatc
gatgtggataagtgggactactttgccagggactgctaccacctgggcatccagaacaac
tttgactatcgccgcttcctgaagtttgccagggtttgtgaggtggacggtcagaagcac
atctgtaccagagacaaggaggtgggcaatctgtacgacatgttccacacaaggaactgt
ctccacagacgagcctaccagcacaaggtcggcaacatcatagaggccatgatcaccgag
gcctttttgaaagcagatccatacatccagattgagggctcagaagggaagatgttcact
ctctccacagccatagacgacatggtggcctacaccaaactgacagataacgtgtttgaa
caaatactccactcgtccgtcacggagctggcagaaccgagggagattctaaacaacatc
atctgtcggcgcctcttcaagtttctgggcgaaacccaggcagacgaacgtttgagtgtc
accaaggagatgattaaaagctgggaggcagagttggctgaggccaaccctcaatgtgag
gcccaggatgtcaacctgctgccagaggacttcgtagttagtatcattaacatggactat
gggatgaaggaaaagaacccaatcaacagtgtgcatttctatagcaaggacaacccaacc
aaagcctaccaaatacgcaagaaccaggtgtcaaaacttcttcctgagcaatttgctgag
cagctgatcagggtctacttcaagaagagggatgataatagtctggacgctgccaagatg
catttcgttcagtggtgcatggacaggaatttctcaaagcctcaggatggagacataata
gcacctgagctgacccctctgaaagccagctggtcgaacatcaatgaacgcgaggatggg
ccgaaaaaagccagaactcagctcaactttgaatga
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