Scophthalmus maximus (turbot): 118317976
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Entry
118317976 CDS
T09850
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smau01002
]
118317976 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118317976 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smau04147
]
118317976 (usp13)
Enzymes [BR:
smau01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118317976 (usp13)
Peptidases and inhibitors [BR:
smau01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118317976 (usp13)
Ubiquitin system [BR:
smau04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118317976 (usp13)
Exosome [BR:
smau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118317976 (usp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
118317976
NCBI-ProteinID:
XP_035503091
EnsemblRapid:
ENSSMAG00025022399
LinkDB
All DBs
Position
13:12024114..12051928
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AA seq
864 aa
AA seq
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MAADLGELLVPYMPTVRVPKTGDRVFKSECAFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAGGAIPRRRNGKVFLDLELNRDFNGEDFEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAPSAYKKQELESWDEEIQVSRHARSLRQLD
NGVRIPPSGWKCQKCEMRENLWLNLTDGAVLCGKWFFDGSGGNGHALEHYRETNHPLAVK
LDTITPDGADVYSFEEEEAVLDPHISEHLSHFGIDMLQMQKRTENGHHTDNNARPRVSEW
EVIQESGMKLKAVYGSGYTGLKNLGNSCYLGTVMQVLFSIPDFQRMYVGNLQRIYDYSPL
DPTQDFATQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEYKVLNWHQQKGVSPRMLKALV
SRGHPEFSSNRQQDAHELLLHIINLVERNSAGSENPSDVFRFLVEERVQCCQTRRVRYSQ
RVDYCIQLPAPIEAATNREELLAYEAKLKDAEENMRAPPEPVRARIPFTACLQAFTEPDN
VPDFWSSALQAKSAGVKTSRFASFPEYLIVQIKKFTFGVDWVPKKLDMAIDVPDFLDLNR
LRATGLQAGEEELPDLMPPIVLSEDTRDNSMGSADSPEIDEVAVMQLAEMGFPLEACRKA
VYYTGNMGPEMAFNWIIAHMEEPDFAEPLSLPSMMDPGPSTADSPMGAATPLANSPPEES
IAILTSMGFPRAHTIQALRATNNNLERALDWIFVHPEEEESDALSDMADTEPNDNAFSNA
NSHSDSTLSPDRETSGPRVKDGPGRYELFAFISHMGASTMSGHYICHIKKEGRWVIYNDH
KVCLSERPPKDLGYIYFYHRLSSS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacctcggagagctgctggtcccctacatgcccaccgtcagggtccccaag
accggcgacagggtcttcaagagcgagtgcgccttctccttcgactctcccgagtctgag
ggaggcctgtatgtgtgtatgaacacattcctgggctttggacgagaacacgtggagaga
cactatcgcaaaacaggacagagtgtttacatgcacctcaagcgacatgtcaaagagaaa
gccacaggagctgcaggaggcgccatccccagacggaggaatggaaaagtgtttctagat
ttagagctaaaccgtgattttaacggagaggactttgaatacgaagatgaggccaagctc
gtcattttcccagaccactttgagatccccttaccaaatattgaggagttgcccgctctg
gtgaccatcgcctgtgacgcagtgctcaatgctccatcagcttacaagaagcaagagctt
gaatcctgggacgaggagatccaggtgtccagacatgccaggagcctcaggcagctggat
aatggggtcagaatcccacccagtggttggaagtgtcagaagtgcgagatgagagagaac
ctgtggctgaacctgacggatggagcagtgctctgtgggaagtggttctttgatgggagc
ggagggaacggccacgcgctggagcactacagagagaccaaccaccccctggctgtcaaa
ctggacaccatcaccccagatggagcagatgtctattcatttgaagaggaagaagctgtg
ttggacccccacatatcagaacacttgtcacactttggaatagacatgctacagatgcag
aaaagaacagagaatgggcaccacacagacaataatgcgcggccgcgagtcagtgaatgg
gaggtgatccaggagtccggcatgaaactgaaggcggtgtacggttctggttacacgggc
ttgaaaaacctgggcaacagctgctacctcggcacagtaatgcaggtcctcttcagcatc
ccagacttccagaggatgtatgtgggtaatcttcagaggatatatgactattcccccctt
gaccccacccaggactttgcaacacaaatggctaaactgggacacggactgctctcaggc
cagtactccaaaccacccatgaaatctgagctcattgaacaggtgatgaaagaagaatac
aaggtattaaactggcaccagcaaaagggcgtttccccgaggatgttgaaggccctggtc
agcaggggacacccagagttttcctcaaacagacaacaagacgcccacgagctcctcctg
cacatcatcaacctagtggagaggaacagtgcaggctcagagaatccaagcgacgtcttc
cgcttcctggtggaggagagagttcagtgctgccagacgcgtcgggtgcgatacagtcag
cgagtggactactgcatccagctgccggctcccatcgaggccgccaccaatcgagaggag
ctgctggcatacgaggccaagctgaaggatgctgaggagaacatgagggctccacctgag
ccagtgagagcacggatccccttcaccgcctgcctgcaggccttcaccgaaccagataac
gtcccggacttctggagctcagcgctacaggccaagtcggccggggtcaaaacttcccgc
tttgcctccttcccagagtatctgattgttcagatcaagaaattcacatttggagttgac
tgggtgccgaagaaactagacatggccatagatgttccggactttctggatctgaaccgg
ctgcgggccactgggttgcaggcgggtgaagaggagctgccggacctcatgcccccaatc
gtgctgtcggaagacaccagagataactccatgggctccgctgactctccagaaatagac
gaggtggcagtaatgcagctggcagagatgggattcccgctggaggcctgtaggaaggcc
gtctactacacaggcaacatggggcctgagatggccttcaactggatcatagcccacatg
gaggagcctgactttgcagaacctctctctctgccctccatgatggatcctggtccctcc
accgctgacagccccatgggtgccgccacccctctggccaactcgccccccgaggagagc
attgccatcctcacctctatgggcttcccccgcgctcacaccatccaggcactcagagcc
acgaacaataacctcgaacgagcactcgactggatcttcgtccatccggaggaggaggag
agcgacgctctttcggacatggctgacacggagcccaacgacaacgctttctccaacgcc
aactcacacagtgactccacgctgtctccagacagagagacatcgggcccgcgggtcaaa
gacggaccgggacgttatgagctatttgctttcatcagccacatgggagcatccacaatg
tctggacattacatctgtcacattaaaaaggagggaaggtgggtgatctacaacgaccac
aaagtgtgtttgtcagaaaggcctccaaaagacttgggctacatctacttttaccatcga
ctgtctagcagttaa
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