Shewanella marisflavi: CFF01_00645
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Entry
CFF01_00645 CDS
T05400
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smav03016
]
CFF01_00645 (trmA)
Enzymes [BR:
smav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
CFF01_00645 (trmA)
Transfer RNA biogenesis [BR:
smav03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
CFF01_00645 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_4
Methyltransf_25
MTS
Methyltransf_15
Methyltransf_11
Met_10
Methyltransf_31
Cons_hypoth95
PrmA
TRM
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
ASJ95214
LinkDB
All DBs
Position
complement(136591..137688)
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AA seq
365 aa
AA seq
DB search
MNLDAMDPKQYDKQLDAKREKLAQLFADFETPELEVFASQDAHYRMRAEFRVWHEGEDLY
YYMFDKALNQKVRCDQFLPASKLINEVMPELMAALRPNQTLRHKLFQVDFLSTLSGEILI
SLLYHKQLDAQWEAEAKVLKQQLSDRFNVNIIGRARKQKLVLDRDFVIETLPVNGQQLVY
KQVENSFTQPNGEVAIKMLEWAIDITRDSSGDLLELYCGNGNFSIALAQNFNRVLATELA
KPSVDSAQYNIEANKVENLQIIRMSAEDFTDALAKKRSFRRLEGVDLDSYNCNTIFVDPP
RAGLDDNTLAMVQGYERIMYISCNPNTLLDNLKVLDKTHKITRFALFDQFPYTDHMESGV
LLERR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagacgcaatggatcctaagcaatacgataagcaactcgatgcgaaacgtgag
aaattagctcagctatttgccgacttcgaaacacctgaattggaagtctttgcttcacaa
gacgcacattatcgcatgcgcgccgaatttcgcgtctggcacgaaggggaagacctctac
tactatatgttcgataaggcacttaaccagaaggtgcgttgtgatcaattcttgccggcg
agcaaactgatcaacgaagtgatgccagagttgatggccgccctgcgtcccaatcagaca
ctcagacacaagctgtttcaggtggactttttgtcgacccttagcggcgagatcttaatt
tcactcttataccataaacagctagatgcacagtgggaagccgaagctaaagtactgaag
caacagctatcagacagattcaatgtcaacatcattggccgtgctcgcaagcagaagctg
gtgctggatcgcgacttcgtaatagaaaccctgccggttaacgggcagcagctagtctat
aaacaggtcgaaaacagctttacccaacccaatggcgaagtcgccatcaagatgctggag
tgggccatcgacatcacccgtgacagcagtggcgacctgctagagctgtattgtggcaac
ggcaacttctccatcgccctggcacaaaatttcaatcgcgtcctagccacagagctggct
aagccttcagtcgactcggcgcagtacaacattgaagccaataaagtcgaaaacctgcag
atcattcgcatgtcggctgaagactttaccgatgctctagcaaagaagcgcagcttcaga
cgactagaaggggtggatttagacagttacaactgcaataccatcttcgtcgatccgcca
cgggcagggctcgatgacaatactctggccatggtgcaaggctacgagcggatcatgtat
atctcgtgcaaccctaataccttactcgataaccttaaggtattagataagacccacaag
atcactcgcttcgcgctatttgaccaattcccctatacggatcatatggagtctggcgtc
ctgttggaacgccgataa
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