Shewanella marisflavi: CFF01_12485
Help
Entry
CFF01_12485 CDS
T05400
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
smav
Shewanella marisflavi
Pathway
smav00521
Streptomycin biosynthesis
smav00523
Polyketide sugar unit biosynthesis
smav00541
O-Antigen nucleotide sugar biosynthesis
smav01100
Metabolic pathways
smav01110
Biosynthesis of secondary metabolites
smav01250
Biosynthesis of nucleotide sugars
Module
smav_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CFF01_12485 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CFF01_12485 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CFF01_12485 (rfbC)
Enzymes [BR:
smav01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CFF01_12485 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ASJ97329
LinkDB
All DBs
Position
complement(2823793..2824338)
Genome browser
AA seq
181 aa
AA seq
DB search
MIIIDTKIPDVKIIEPTVFGDERGFFMETWNQKQFEKLVTGKPTQFVQDNHSKSKKGILR
GLHYQTENTQGKLVRVIAGEVFDVAVDIRKNSSTFGQWVGVYLSSENKRQLWVPEGFAHG
FYVTSDEAEFVYKCTNYYSPEFEISIKWDDDYLGIDWPITHKVMLSEKDCKAMAFKAFSK
C
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgataataatcgacactaaaattccagatgtaaaaatcattgagccaacagtatttggt
gatgagcgtggcttctttatggaaacatggaatcaaaaacaatttgaaaagctcgtaact
ggtaaaccaacgcaatttgtgcaagataatcattcaaaatccaagaaaggaattttacga
gggttacattaccagaccgaaaatactcaagggaagctcgtaagggtcattgctggagag
gtatttgatgtagcagtagatattcgaaaaaattcatcaacgttcggtcagtgggttggc
gtgtatttgtcatcggaaaataaaagacagctttgggtgcctgaagggtttgcccacggt
ttttatgtgacgagtgatgaggctgaatttgtttataaatgtacaaattactacagcccg
gaatttgagatatctattaaatgggatgatgactacttagggattgattggcctattaca
cataaagtaatgttatcagaaaaagactgtaaagcgatggcatttaaggctttttctaaa
tgttag
DBGET
integrated database retrieval system