Shewanella marisflavi: CFF01_13570
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Entry
CFF01_13570 CDS
T05400
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
smav
Shewanella marisflavi
Pathway
smav01501
beta-Lactam resistance
smav01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CFF01_13570
01503 Cationic antimicrobial peptide (CAMP) resistance
CFF01_13570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smav02000
]
CFF01_13570
01504 Antimicrobial resistance genes [BR:
smav01504
]
CFF01_13570
Transporters [BR:
smav02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CFF01_13570
Antimicrobial resistance genes [BR:
smav01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CFF01_13570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
ASJ97522
UniProt:
A0AAC9XP45
LinkDB
All DBs
Position
complement(3061982..3065104)
Genome browser
AA seq
1040 aa
AA seq
DB search
MISEFFIHRPKFAFVISTVLTLVGLISIPILSVAEFPEIAPPQVNVSTSYSGASADIVKD
TIAQPIEAEVNGVEGMLYMQSKSANDGSYSLNVTFDVGTDADMAQVKVQNRVQQAMPRLP
EEVKRQGVKVEKQSPNILMVVNLVSPNETFDSLFITNYAGLNVKDALARQNGVSKVQVIG
ALDYAMRIWLDPNNMASFGVTASDVIAALKEQNIQVAAGRIGAAPVDPDQQFQYTLQTKG
RLKDPKEFGRVMIRANPDGSKVIVSDVARVELGSQTYDAQGKLNNKPSAIIAIYQAPDAN
ALDVAAAIKDEMEDLASRFPDDLEYKVLYDTTEFVQTSITEVIQTLFISIALVVFVVFIF
LQDGRSTLVPGIAIPVSLVGTFAFLLLFGMSINTVSLFALILAIGIVVDDAIVVVENVTR
LMQDEGLSPAEATSKAMKEVTGPIIATTLVLLAVFAPTAVMPGITGQMYAQFSVTICISV
LISSVNALTLSPALCASLLKPPKTHTQGFHYLFNRYFERFTGSYMKLVSSLVRKLVLVGV
AYVCLIGLTGGIAKVLPSGFVPMEDKKAFMVDIQLPDGASLNRTEEVMRELVTQTLAEPG
VENVIHASGFSILTGSVSSNGGLMIVTLSTWEERSSPDMVEAAIVARLQAKYAANPSVKA
MAFSLPPIPGVGSVGGFEFVLQDTQGRSPQELAAVMRALIMKANEQSEIAMAFSNFRADV
PQMFVDVDRDKAKALGISLNEIFATMQTMLGSMYVNDFNRFGKVFRVILQAEGEFRNSDK
DIANFYVRSATGEMVPLSTLVKVTPILGPDVMNAYNMFSSTTINGFPAPGYSSGDAIAAM
ERAAQQSLPSGYKFEWTGQTYQEIKAGNLAPVIFALALVFTYLFLVAQYESWSIPFAVML
AVPIAILGAFLNILLVGSELNLYAQIGLVLLIGLACKNAILIVEFAKQLREEGKSILDAA
ETAARLRFRAVLMTAFSFLLGVLPLVIATGAGAGSRRALGYSVFGGMMAATLVGTLLVPV
FYVIMQRLRERLKGEHQASQ
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgatcagtgagttttttattcataggccaaaatttgccttcgtgatctcgaccgtgttg
accttggtaggtttaatctctattcctatcttgtcggtcgccgagtttcccgagatagcg
ccgcctcaggttaatgtgagcactagctattcgggggccagcgccgatattgtcaaagac
accatagctcagcctattgaggcagaggtcaacggcgtcgaaggcatgctctatatgcag
tccaagagcgccaacgacggtagctattcactgaatgttaccttcgatgtgggcaccgat
gccgatatggcgcaggtgaaagtgcaaaaccgggtgcagcaggccatgcccagactgccc
gaggaggttaagcgccagggcgttaaagtcgaaaagcaaagtcccaacattttaatggtg
gtaaacctggtatcacccaatgagacctttgattccctttttattactaactatgccggc
ctgaacgttaaagatgcgctggcgaggcaaaatggtgtctctaaggtacaggtgattggc
gcgctggattacgccatgcgtatctggctggatcctaataatatggccagctttggcgtg
acagccagcgatgtgattgccgccctgaaagagcaaaatattcaggttgcggccggtcgt
atcggtgccgcgcctgtggatcccgatcagcagtttcaatataccctgcagactaaggga
cgccttaaggatcccaaggagtttggccgggtgatgattcgtgctaaccccgatggctct
aaggtgatcgtttccgacgtcgctcgggtcgagctgggttcgcaaacctatgacgcacag
ggcaagctgaacaataaaccgtcggccattatcgccatctatcaggctcctgacgctaat
gcgctggatgtggccgcggcgatcaaggacgagatggaggacctggctagccgtttcccg
gacgatctggaatacaaggtgctttatgacaccactgaatttgttcagacttcaattaca
gaggtgattcagacgctctttatctccatcgctctggttgtctttgtggtgtttatcttc
ctgcaagatgggcgttcaaccttagtgccaggcatcgcgattcccgtttccttggtgggt
acctttgcgtttcttctgctctttggcatgagtatcaataccgtctctttgttcgcgttg
atcttggccattggtatcgtggtggatgacgccatcgtggtggtggagaacgtgacccgt
ctgatgcaagatgagggactctcgccagctgaggcgacctctaaggcgatgaaagaggtg
acaggacctattatcgccaccaccttagtgctgctggcggtgtttgcgcccacggctgtg
atgccggggatcacggggcagatgtatgcccagttttcggtgaccatctgtatttctgtg
ctgatctcctcggtcaatgcgcttaccctgagtccggcactgtgtgcctccttgttgaag
ccgcccaagacacatacacaaggttttcactatctgtttaaccgctatttcgagcgcttt
accggcagctatatgaagctggtttcctctctggtgcgtaaattggtgttggtcggtgta
gcctatgtttgtcttatcggcctgacgggggggattgccaaggtgttgccttcaggcttt
gtgcccatggaagataagaaagcctttatggtggacattcaactacccgatggggcatcg
ctcaaccgtaccgaggaggtgatgcgtgagctggtaacacagacgcttgccgagcccggg
gttgaaaatgtgattcatgccagtggctttagtatcttaaccggttctgtctcttccaac
ggtggtttgatgattgtgaccctgtccacctgggaggagcgcagctcgcctgatatggtc
gaggccgctattgtggccagactacaggcaaaatatgccgccaatccttcggtgaaggcg
atggccttctctctgccacctattcccggggtggggagcgtaggtggctttgagtttgtg
ctgcaagatacacaaggacgctcaccacaggagctggctgccgtgatgcgggccttgatc
atgaaggccaacgagcagagcgaaatcgccatggcattcagtaatttccgtgccgatgta
ccgcagatgtttgtggatgtggatcgtgacaaggcaaaggcgctggggatctcattaaac
gagatcttcgcgaccatgcagaccatgctgggctctatgtatgtcaacgatttcaatcgg
tttggtaaggtatttagggtgatattgcaggccgaaggggagtttcgaaattctgacaag
gatatcgctaatttttatgtgcgctccgccactggtgagatggtgcccctcagtaccctg
gttaaggtgacgcctatcttggggccggatgtgatgaacgcctacaatatgtttagttcg
accaccatcaatggtttccctgcgcccggttatagctcgggtgacgccattgctgcgatg
gaacgagcggcgcagcaatctctgccttcgggctataagtttgagtggacagggcagact
tatcaggagatcaaggcgggtaacctggcgccggtgatcttcgccttagcgctggtgttt
acctacctgttcttggtggcgcaatatgagagttggagtattccctttgcggtgatgttg
gcggtgcctattgccatcttaggggctttcctcaatatcttgttagtgggaagcgagctc
aacctctatgctcagataggcttagtgctcttgatcggcctggcctgtaaaaatgccatc
ttgatcgtcgagtttgccaagcaactcagggaagagggcaagagtattttggatgcggca
gaaactgcggccagattgcgttttcgcgcggtgctgatgacggccttctctttcttgctg
ggggtattgcctttggtgatagccactggcgccggagctgggagtcgccgggcgttgggt
tactcagtctttggtggcatgatggcggcaacattggtaggtaccctgttagtacctgtg
ttttatgtgattatgcagagattgcgtgaacgcttgaaaggggaacatcaggcgagccaa
tag
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