Shewanella mangrovisoli: K0H60_11220
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Entry
K0H60_11220 CDS
T09316
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
smay
Shewanella mangrovisoli
Pathway
smay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K0H60_11220 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smay03400
]
K0H60_11220 (recD)
Enzymes [BR:
smay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K0H60_11220 (recD)
DNA repair and recombination proteins [BR:
smay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K0H60_11220 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
SH3_13
RecD_N
Helicase_RecD
AAA_11
AAA_22
UvrD-helicase
AAA_16
SLFN-g3_helicase
DEAD
UvrD_C
PhoH
AAA_28
nSTAND3
PIF1
ResIII
Flavi_DEAD
DUF4164
NACHT
AAA
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QYK07419
LinkDB
All DBs
Position
2570136..2572259
Genome browser
AA seq
707 aa
AA seq
DB search
MNHSTELTPPKVSTQWVDAGALRLKAPLAELLKYWEKERLITPLDRHFALEMARLHPNDA
HEPLFMLLCALLSQQLSAQHTCLVLEHIVPANPMAEPVNHCQIRLSLPELIARLQNFEAV
GEPHSNKPLIFDGGRLYLERYHHFETEVASALTRLSSSQPVNTTDKDSDAPLRRQLDYLF
PIAASSHATTTLEPHIDWQKVATATALGKKLAVITGGPGTGKTTTVTKLLLLQQLGSPKQ
IRLVAPTGKAAARLSESIKASKARLEQELKQAQATNEQVQSHETQALLAALKQVPEEAST
LHRLLGVIPNSAQFRHHQGNPLRLDLLIVDEASMVDLPMMYKLLTALPEQAGLILLGDQD
QLASVEAGAVLADICAGLKYESDQHSEWRMRYSQAQAEQLSKLTSFDLRAYIHREPKIGD
SLCMLTHSHRFKGDAGIGLLASAVNRSDLAGILTVWQRGLAELTWLEHSMDLSQTQAKIS
EPANNSGLHALLTQACEQYAEYLRPLQISDPSSVPSAIEAIARFNQYRILCAMRSGDYGV
EGINQAVTKALSQAKLIHPQQEFYLGRPIIIQSNDYNLGLFNGDIGLILQDEDRPERLMA
HFIKADGKLLKVLPARLPSHETCYAMTVHKSQGSEFNRVALVLPPNPSLVQWQLLTKELV
YTAITRAKQHFSCLGTQQVFERASQQATQRASGLADRLWRDKAMTNE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacagcaccgaactgactcccccaaaagtatcaacccaatgggttgacgctggc
gctctcagactcaaggcgccgctcgcagagctactcaaatattgggaaaaggagcggctg
atcaccccgctcgatcgccattttgccctcgagatggcaaggcttcatcctaatgatgcc
cacgagccactgtttatgctgctgtgcgccctgttaagtcaacagctctcggcccaacat
acctgtctagtgctcgaacatatagtgccagccaatccgatggcagagccggttaaccac
tgccaaatccgtttgagcctgccagagctgattgcaaggctgcaaaattttgaggccgtt
ggcgaacctcacagcaataagccactgatttttgatggcggtcgactctatcttgagcgt
tatcatcatttcgaaaccgaagttgccagcgccctgacgaggctatcttcgagtcagccc
gtcaacaccacggataaagattcagacgcgccgctacgcaggcagctcgattacttattt
ccaatcgccgcatcttcccatgcaaccacaacccttgagcctcatatcgactggcaaaag
gtggcgacggcaacggcgctcggcaagaagcttgcggtgatcaccggcggccctggtaca
ggcaaaaccaccacagtgacgaagttactgttgctacagcaattaggttcaccaaaacag
ataagactcgtcgccccgacaggtaaggccgccgcccgtttaagtgaatcgataaaggcc
tcgaaagcaagactcgagcaggaactcaaacaggctcaagcgacaaacgaacaagtacaa
agtcacgaaacccaagcgctgttagccgcgctcaagcaagtgccggaagaggcatcaacc
ttacatcgtctgctgggggttatccccaattcggcgcagtttcgtcaccatcagggcaat
cccctgcggctagatctcttgattgtcgatgaagcctcaatggtcgatttgccaatgatg
tataagctgctcacggccctccccgaacaggcgggtttgatactgcttggggatcaggac
caactcgcctcggttgaagcaggcgcagtgctagccgatatttgcgcaggactaaaatac
gagtcagaccaacactctgaatggcgaatgcgttatagccaagctcaggccgaacaattg
agcaagctcaccagctttgatctgcgcgcctatattcaccgcgagccaaagattggcgac
agtttgtgtatgttgacccacagccacagatttaagggcgatgcgggcattggcctatta
gccagtgcggtgaatcgctccgatctggcggggattttgaccgtatggcaacggggactg
gccgagcttacttggctagaacacagtatggatctgagccagacccaagccaaaatcagc
gagcctgcaaacaacagcggccttcatgccctgctaacacaggcctgtgagcaatacgct
gagtatttacgtccgctgcaaatttcagatccaagcagtgtgccaagcgccatcgaagcc
attgcccgctttaaccagtatcgtatcctatgcgccatgcgcagtggcgattatggtgtc
gaaggtatcaatcaagctgtgactaaggcgctgtctcaggccaagctgatccatccccag
caagagttttaccttggcaggccgattattatccaaagcaatgactataacttgggcttg
tttaacggtgatattggcttgattttgcaggatgaagacaggccagagcgactgatggcc
cactttattaaagccgacggcaaactgcttaaagtgctccccgcaaggctacctagccat
gaaacctgctacgccatgacggtgcataaaagtcagggcagtgaatttaatagagtcgcc
ctcgtacttccgcccaatccgagcctagtacagtggcaattgctcaccaaggagctagtc
tacactgcgattacccgtgcaaaacaacattttagctgtttaggcacacagcaagttttc
gagcgagcaagccaacaagctacccagcgggcctcaggtttagccgataggctctggcgc
gataaagcgatgactaatgaatag
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