Streptococcus mutans NN2025 (serotype c): SmuNN2025_1192
Help
Entry
SmuNN2025_1192 CDS
T01185
Symbol
rpoD
Name
(GenBank) DNA-dependent RNA polymerase sigma subunit
KO
K03086
RNA polymerase primary sigma factor
Organism
smc
Streptococcus mutans NN2025 (serotype c)
Pathway
smc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
smc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SmuNN2025_1192 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smc03021
]
SmuNN2025_1192 (rpoD)
Transcription machinery [BR:
smc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SmuNN2025_1192 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DprA_WH
DUF2316
DBD_HTH
Motif
Other DBs
NCBI-ProteinID:
BAH88218
LinkDB
All DBs
Position
complement(1257988..1259103)
Genome browser
AA seq
371 aa
AA seq
DB search
MVNNKKKTSSTFNVQVADFIRNHKKEGVAVDDEVTEKLVIPFELEAEQIDDLLERLTDGG
ISITDREGNPSTKYAVEEIKPEELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEEEK
ELAIAVENGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYS
KGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQ
IAERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLRE
QLDEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFDVTRERIRQIEAKALRKLRHPS
RSKQLRDFVED
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggtaaataataagaaaaagacatcaagtacttttaatgttcaagttgcagattttatt
cgcaaccataaaaaagagggagttgctgttgatgatgaagttactgaaaaattagttatc
ccttttgaacttgaagcagagcagattgatgatttgctggaacgtttgacagatggcggt
atctcaattactgacagagaaggcaatccttctaccaaatatgctgttgaagaaattaaa
ccagaagaattaaccgatgaagaattattaggcagtaattctgccaaggttaatgatcct
gttcgcatgtatttaaaagagattggcgttgttcctcttttgactaatgaagaagaaaaa
gaactagctattgctgttgaaaatggcgatcttgaagcgaagcagcgcttggcagaagct
aatttgcgtttggttgtttccattgcaaaacgatacgtaggacgcggaatgcagtttctt
gatctcattcaagaaggtaatatgggtttaatgaaggcagttgataaatttgattattcc
aaaggtttcaagttttcaacctatgcaacttggtggattcgtcaggcaatcacacgtgcc
attgcggaccaagcacgtacgattcgtattccagtacatatggtggaaacgatcaataag
ctggtgcgtgaacagcgcaatcttcttcaagaactgggacaagatccaacaccggagcaa
attgctgagcgaatggatatgacaccagataaagtgcgtgaaattttaaaaattgctcaa
gaaccggtgtctcttgaaacgccaattggtgaagaagatgacagccatctaggcgatttt
attgaagatgaagtcatcgaaaatcccgttgattatacaactcgtgttgtcttgcgtgag
cagttagatgaagttttggatactcttactgatcgtgaagaaaatgtccttcgtctgcgt
ttcgggcttgatgatggaaaaatgcggacgcttgaagatgttggtaaagtctttgatgtt
actcgtgaacgtattcgtcaaattgaggctaaagcgcttcgcaagctgcgtcaccctagt
cgcagcaagcagttgcgtgactttgttgaagattaa
DBGET
integrated database retrieval system
