Sinorhizobium medicae: Smed_4038
Help
Entry
Smed_4038 CDS
T00555
Name
(GenBank) alpha amylase catalytic region
KO
K05343
maltose alpha-D-glucosyltransferase / alpha-amylase [EC:
5.4.99.16
3.2.1.1
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00500
Starch and sucrose metabolism
smd01100
Metabolic pathways
smd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Smed_4038
Enzymes [BR:
smd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
Smed_4038
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.16 maltose alpha-D-glucosyltransferase
Smed_4038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Malt_amylase_C
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
ABR62846
UniProt:
A6UGR6
LinkDB
All DBs
Position
pSMED01:complement(499771..501405)
Genome browser
AA seq
544 aa
AA seq
DB search
MNEAPWFTSSVIYGIDVRRFADGNGDGIGDFIGLRERVVYLSHLGIDCVWLSPFFRSPFA
DNGYDVSDYYSVDPALGTLDDFLNFLHAAGEHGIRVIIDLVANHTSSEHPWFQAARRDAR
CRFRDYYVWSASPPPVAPDNKTAFPGEESSVWTYDELAQAYYFHKFRHFQPDLNIANPAV
RDELLRVVDYWLTLGVDGFRVDAAPFVIGETGIEHADPRDPHGFLREMRELVEGRRRDGL
LLGEADLSPEKLRPYFGEGKLDLLFNFVLSASFAASLARQKADLIGQALSIMPEPPPHRG
WVNFLRNLDELNLDRLPEDIQQETFAAFAPDEEMRIYGRGIRRRLAPMLEGNQTRLELAF
SLLLSSPGVPLVLYGDEIGMGEDPSRPGREPVRVPMQWNAGANAGFSTAQRARLIQPIVT
DGPFAFKRINVEAQREDPRSLLNRVRAMILMRRSHKLFQRGRPIVLHTRDPALFALAYSD
GTELFVVLHNLTEAKRRAEVELPGAIDARLKDVFGEGEVELSGQHLTMGLGPFGYAWLHS
GRKD
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaggcgccgtggttcacaagctcggtcatctatggaatcgacgtgcgaaggttc
gctgacggaaacggcgacgggatcggcgacttcatcggactgagggagcgggtagtctat
ctgagccacctcggcatcgactgcgtctggctgtcgcccttcttcaggtcccccttcgcc
gacaatggttacgacgtcagcgactattactctgtcgatcctgcgctcgggacgctggac
gacttcctgaactttctgcacgctgccggcgaacacggtattcgcgtcatcatcgatctc
gtcgccaaccacacatcgagcgagcatccgtggtttcaggccgcacggcgggatgcgagg
tgccgcttccgcgattactatgtctggtccgccagcccgccgccggtcgctccggacaac
aagacggcatttcccggtgaggaaagcagcgtctggacgtatgacgagctcgcccaggcc
tattattttcacaagtttcgccacttccagccggacctgaacatcgccaatccggcggtg
cgcgacgaattgctccgcgtggtcgattactggctgacattgggcgtcgacggcttccgg
gttgatgccgcgcccttcgtcatcggcgagacgggcatagaacacgctgatcccagggat
cctcatggcttcctgcgggagatgcgtgagctggtcgaaggcagacgccgggatggtctt
ctgctcggcgaggcggacctctcgcctgaaaagctgcgcccctatttcggtgaagggaaa
ctcgatcttctgttcaacttcgttctgagcgcgtctttcgcggcaagcctcgcgcggcag
aaggccgatctcataggtcaggcgctttcgataatgccggagccgcctccccatcgaggc
tgggtcaatttccttcgcaatctcgacgagctcaacctcgaccgcctgccggaagacatc
cagcaggagacctttgccgccttcgctccggacgaggagatgcggatctacggacgcggc
atcaggcgtcggctcgcaccgatgctcgagggaaaccagacgagattggaactggcgttc
agcctgcttctttcttctccgggcgtgccccttgtcctctacggcgacgaaataggcatg
ggcgaagacccttcccgcccgggccgtgagcccgtccgcgtccccatgcagtggaacgct
ggcgccaatgccggcttttccacggcccagcgcgccaggctcatacagccaatcgtgacc
gacggacccttcgccttcaagcggatcaatgtcgaagcacagcgagaggacccccggtcg
ctcctcaaccgcgtccgggcgatgatcctgatgcggcgcagtcacaagctttttcaaagg
ggccggccgatcgtgctgcatacacgggatcccgcgctgtttgcgctcgcctattccgac
ggcaccgagctgttcgtcgtgctgcataatctaacggaggccaagcggcgggcggaagtc
gaactgcccggcgccatcgacgccaggctcaaggatgttttcggcgaaggcgaggtcgag
ctctccggccagcatctgacgatgggtcttggcccattcggctatgcctggctccattcg
ggaaggaaggactga
DBGET
integrated database retrieval system
