Sinorhizobium medicae: Smed_4308
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Entry
Smed_4308 CDS
T00555
Name
(GenBank) glyoxylate carboligase
KO
K01608
tartronate-semialdehyde synthase [EC:
4.1.1.47
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00630
Glyoxylate and dicarboxylate metabolism
smd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Smed_4308
Enzymes [BR:
smd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.47 tartronate-semialdehyde synthase
Smed_4308
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Gene cluster
GFIT
Motif
Pfam:
TPP_enzyme_M
TPP_enzyme_C
TPP_enzyme_N
Motif
Other DBs
NCBI-ProteinID:
ABR63113
UniProt:
A6UHI3
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Position
pSMED01:804315..806099
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AA seq
594 aa
AA seq
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MAKMRAVDAAVFVLEKEGIDCAFGVPGAAINPFYSALRARGSIRHILARHVEGASHMAEG
YTRAKHGNIGVCIGTSGPAGTDMITGLYSASADSIPILCITGQAPRARLDKEDFQAVDIA
KIAAPVTKWAVTVMEPALVPFVFQKAFHLMRSGRPGPVLIDLPVDVQLAEIEFDPETYEP
LTPYKPAATRAQAEKALAMLNAAERPLIVAGGGIINADASDLLTEFAEITGVPVVPTLMG
WGVIPDDHPLMAGMCGLQTSHRYGNATLLASDFVFGIGNRWANRHTGNVPTYTEGRKFIH
VDIEPTQIGRVFAPDFGIVSDAGAALKLFLDVATEWKTAGKLRDWSGWAGECRERKRTML
RKTHFDQTPLKPQRVYEEMNKAFGRDTCYVSTIGLSQIAGAQFLHVYKPRNWINCGQAGP
LGWTLPAALGVRAADPNRPIVALSGDYDFQFLIEELAVGAQHKLPYLHVVVNNSYLGLIR
QAQRGFNMDFEVSLAFENINAEGDAEKGYGVDHVAVAEGLGCKAIRVRSPNEFADAFDRA
QALMEEHQVPVVIEFILERVTNIAMGTDINSVVEFEELAERGEDAPTAVAALLD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatgcgcgccgtcgatgcagcagttttcgtactggagaaggaagggatcgat
tgcgccttcggcgtgcccggcgcggcgatcaaccccttctactcggccctgagggcacgc
ggatcgatccgccacattctcgctcgccatgtcgagggcgcttcgcacatggcggagggc
tacacccgcgccaagcacggcaatatcggcgtttgcatcggcacctcgggcccggccggc
acggacatgatcaccggcctctattcggcctccgcggattcgatcccgattctctgcatc
accgggcaagcgccgcgggcgcgccttgacaaagaggattttcaggcggtcgacatcgcc
aagatcgcagcacctgtcacgaaatgggcggtcaccgtcatggagccggcgcttgtcccc
ttcgtcttccagaaggcgtttcacctgatgcgctccggccgcccggggccggtcctcatc
gatctgcccgtcgatgtccaactggccgagatcgaattcgatccggaaacctacgagccg
cttaccccctacaagccggccgccacgcgtgcacaggccgaaaaggcgctcgccatgctg
aatgcggcggagcggccgctgatcgtcgccggtggtggcatcatcaatgcggatgcatcc
gatctccttaccgaatttgccgagatcaccggcgttccggtcgttccgacgctgatgggc
tggggcgtcatccctgacgaccatccgctgatggcagggatgtgcggcctgcagacctca
caccgttacggcaatgcgaccctgcttgcttccgatttcgtctttggcataggcaatcgc
tgggccaaccgtcacaccggcaatgttccgacctataccgaaggccgcaagttcatccat
gtcgatatcgagccgacgcagatcggccgcgtctttgctcccgatttcgggatcgtctcc
gacgcaggtgccgcgctcaagctctttctcgacgtcgcgacagaatggaagaccgccggc
aagctgcgcgactggtcgggctgggccggagaatgccgcgaacgcaagcggaccatgctg
cgcaaaacccattttgatcagacgccgctgaaaccccagcgcgtctacgaggagatgaac
aaggccttcggccgcgacacctgctacgtctccacgatagggcttagccagattgccggt
gcgcagttcctgcacgtttacaagccccgcaactggatcaattgcggacaggcgggcccg
cttggctggacgctgccggcggcgctcggcgtaagagccgctgacccgaaccgaccgatc
gtcgcactttccggcgattacgacttccagttcctgatcgaggaactcgcggttggtgcc
cagcacaagctcccttacctgcatgtcgtcgtgaacaactcctatctcggcctgatccgg
caggcgcagcgtggcttcaacatggatttcgaggtcagcctcgcctttgaaaacatcaat
gccgagggtgatgcggagaaggggtatggggtcgaccatgtggcggttgccgaaggcctc
ggctgcaaggccattcgcgtcaggagcccgaatgagttcgccgacgccttcgacagggcg
caggctctgatggaagagcaccaggtgcccgtcgtcatcgaattcatcctggagcgcgtc
accaatatcgccatgggcacggatatcaattcggtcgtcgagttcgaggaactcgccgaa
cgcggcgaggacgcaccgaccgcggttgccgccctgctcgattga
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