Sinorhizobium medicae: Smed_4722
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Entry
Smed_4722 CDS
T00555
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00521
Streptomycin biosynthesis
smd00523
Polyketide sugar unit biosynthesis
smd00541
O-Antigen nucleotide sugar biosynthesis
smd01100
Metabolic pathways
smd01110
Biosynthesis of secondary metabolites
smd01250
Biosynthesis of nucleotide sugars
Module
smd_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Smed_4722
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Smed_4722
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Smed_4722
Enzymes [BR:
smd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Smed_4722
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Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ABR63519
UniProt:
A6UIN9
LinkDB
All DBs
Position
pSMED01:1245365..1245928
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AA seq
187 aa
AA seq
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MLEVRPLSLGGVLEIVPRKFGDERGFFSETFNAETLAAQGVELSFVQDNHSYSALAGTLR
GLHYQLPPKAQAKLVRVVRGRVFDVVVDIRKGSPSFAKWLGLELSAERWNQILVPAGFAH
GFVTLEPETEVLYKVTEHYSAEHERSIRFDDPAIGIGWPVAADRLQLSAKDRNAALLNES
NLFEFTA
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaagtgaggccgttgtcccttggtggcgtgctggagatcgtgccgcggaaattc
ggtgacgaacggggcttcttttcggaaaccttcaatgcggagaccctggccgcccaagga
gtcgagctcagcttcgtgcaggacaatcattcctactcggcattggcaggtacccttcgg
gggctgcattatcaacttccgcccaaggcgcaggcgaagctcgttcgcgtcgtgcggggc
cgggtattcgacgtcgttgtcgacatccgcaagggttcgccgagcttcgcaaagtggctc
ggtctcgaactctcggccgagagatggaaccagatcctggtgcccgccggcttcgcacac
gggttcgtcacgctcgagccggagacggaagttctctacaaggtcaccgagcattacagc
gcggaacacgagcggtcgatccgcttcgatgaccctgcgataggaataggctggccagtg
gctgccgatcgcctgcaactgtccgcgaaagacaggaacgcagcattactcaacgaatcc
aatttattcgagttcaccgcatga
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