Sinorhizobium medicae: Smed_4812
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Entry
Smed_4812 CDS
T00555
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00521
Streptomycin biosynthesis
smd00523
Polyketide sugar unit biosynthesis
smd00525
Acarbose and validamycin biosynthesis
smd00541
O-Antigen nucleotide sugar biosynthesis
smd01100
Metabolic pathways
smd01110
Biosynthesis of secondary metabolites
smd01250
Biosynthesis of nucleotide sugars
Module
smd_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Smed_4812
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Smed_4812
01055 Biosynthesis of vancomycin group antibiotics
Smed_4812
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Smed_4812
00525 Acarbose and validamycin biosynthesis
Smed_4812
Enzymes [BR:
smd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
Smed_4812
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Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
3Beta_HSD
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
ABR63605
UniProt:
A6UIX5
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All DBs
Position
pSMED01:complement(1331992..1333059)
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AA seq
355 aa
AA seq
DB search
MNILVTGGAGFIGSALCRHLVADPDNRVVSLDKLTYAGNLASLRQIENLRNYRFVRADIC
DEGAIASILSAEKIDRIMHLAAETHVDRSIDGPGAFIETNILGTFRLLQAALHYWRGLCG
RAAEAFRFHHVSTDEVFGALSLDDESFNESTPYAPSSPYSASKAASDHLVRAWHHTFGLP
VVLTNCSNNYGPFQFPEKLIPLTILNAMEERPLPVYGNGTNVRDWLYVDDHARALDLVAL
KGTVSESYNIGGGCERTNLHVVDTICDILDGKRPRRNGKSHRDLIAFVDDRPGHDWRYAM
DTSKIERELGLKPRESFETGIERTIDWYLENGWWWQPIRDRNYRGERLGRSVAAP
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
gtgaacatcctcgtgaccggcggtgccggcttcattggttccgcactttgccggcacctc
gtcgccgatcctgacaatcgcgtggtcagcctcgacaagctcacgtatgccggcaatctg
gcctccctccggcaaatcgagaatcttcgcaactacagatttgtccgagcggacatctgc
gatgaaggggccatcgccagcattctgtctgcagagaagatcgatcgcatcatgcatctg
gccgccgaaacgcatgtggaccggtcgatcgacggtcccggcgcatttatcgagaccaac
atcctgggaacgttccggctgctccaggccgccctgcactattggcgtgggctgtgcgga
agggcggcggaggcattccgcttccatcatgtttcgaccgacgaagtattcggcgcactt
tcccttgacgacgaaagcttcaacgaatccactccctatgctccttcctcgccctattcc
gcctctaaagcggcgtccgatcacctcgtccgggcctggcatcacaccttcgggctgccg
gtcgttctcaccaactgctcgaacaattacggcccgttccagttccccgagaagctgata
ccgctgaccatcctcaacgcgatggaggaaaggccgctgcccgtttatggaaacggtacg
aatgttcgcgactggctctatgtcgacgaccatgcgcgtgcgctcgatctggttgcgctc
aaagggactgtcagtgagagctacaatattggcggaggctgcgaacgcacgaacctccac
gtagtggacacgatttgcgatatcctcgacggcaagcggccgcgccgcaacggcaagagc
catcgcgacctcattgctttcgtggacgaccggccaggtcacgactggcgctatgccatg
gacacctccaagatcgagcgtgagctcgggttgaaaccgagggaaagttttgagacgggc
atcgagcggacgatcgactggtatctggaaaatggctggtggtggcagccgatccgcgac
cgcaactatcgcggtgagcgcctcggcagatcggtggccgcgccatga
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