Sulfitobacter mediterraneus: JNX03_13325
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Entry
JNX03_13325 CDS
T07747
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
smed
Sulfitobacter mediterraneus
Brite
KEGG Orthology (KO) [BR:
smed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smed03009
]
JNX03_13325
Enzymes [BR:
smed01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
JNX03_13325
Ribosome biogenesis [BR:
smed03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JNX03_13325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
Cons_hypoth95
Met_10
Motif
Other DBs
NCBI-ProteinID:
QRD41557
LinkDB
All DBs
Position
complement(2687346..2688566)
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AA seq
406 aa
AA seq
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MTEHQILRLGHHGDGIADGPIFAPLTLPGEVVSGTVSGNTLTDVRILKPSDDRVAPPCRH
FKSCGGCQLQHASDDLVAGWKQDVVKHALDAHGLETVFKPLHTSPPQSRRRATFAARRTK
KGAMAGFYGRGSDVLIEIPDCKLLAPEVLEGRAVAEDLALVGTSRKAALAVTVTVSANGL
DVAVAHGKPLDGPLRQELASLCERRGLARLSWDDEVIAMRHAPVQAFGRAAVTPPPGAFL
QATQDGEAALLSAVKEAVAGADALADLFAGCGTFALPLAETARVHAVESVAEMMTALDHG
WRMAEGLKPVTTETRDLFRRPLLPDEMRKLDAVVLDPPRAGAERQVAEIVTARVPQVAYV
SCNPVTFARDAQTMVSAGYTLNWVQVVDQFRWSSHVELAASLTAPT
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacatcaaattcttcgactgggccaccacggcgatggtatcgccgatggcccg
atctttgcgccgctgacccttcccggagaggtggtgtccggcacagtttcgggaaacacc
ctgacggatgtgcgtatcctgaaaccgtctgacgatcgggtcgcgccgccctgtcggcat
ttcaaatcctgcggtggatgccagttgcagcatgcatcggatgatctggtcgcgggctgg
aagcaagacgtggtgaaacatgcgctggacgcgcatgggttagagactgtttttaagccg
cttcacacgtcgcctccccagtccagacgccgggcgacctttgcagcaaggcgcaccaaa
aaaggcgcaatggcagggttttatggccgtggctcggacgtgttgattgaaattccagac
tgtaagttgctggcgcccgaggtcttggaaggccgcgccgtggccgaagatctggcgctg
gtcgggaccagccgcaaggcggcgcttgccgtgactgtgacggtatcggccaacgggctg
gatgtcgcggtggcgcatggcaaaccgcttgatgggccgctgcggcaagaattggccagt
ctctgcgagcggcgcggtttggcgcgtctcagctgggacgatgaggtgattgcgatgcgc
catgcaccggtgcaggcctttggccgcgccgccgttaccccgccacctggtgcgtttttg
caagccacgcaggacggtgaggcggcattgttgtctgcggtcaaagaggcggttgcgggg
gcggatgcattggccgatctgtttgccggttgcggcacatttgcactgccgcttgcagaa
actgcgcgtgtgcatgcggttgaaagcgttgcggaaatgatgacagcgctggatcatggc
tggcggatggcagagggcctcaagcctgtgacaacagagacccgggatctgtttcggcgg
ccgctgttgcccgatgagatgcgcaaactggatgcggtcgttctggacccacctcgcgcc
ggtgccgagcggcaggtggccgagattgtgaccgcccgcgtgccgcaggtggcctatgtg
tcgtgcaatccggtgacctttgcccgcgatgcccagacgatggtcagcgcaggttacacg
ttgaactgggtgcaggttgttgatcagttccgctggtcatctcatgttgaactggcggca
agcctgaccgcgccaacctga
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